Protein–RNA interactions for Protein: O95347

SMC2, Structural maintenance of chromosomes protein 2, humanhuman

Predictions only

Length 1,197 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2O95347 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.74■■■□□ 2.03
SMC2O95347 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC27.73■■■□□ 2.03
SMC2O95347 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC27.73■■■□□ 2.03
SMC2O95347 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC27.73■■■□□ 2.03
SMC2O95347 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC27.73■■■□□ 2.03
SMC2O95347 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC27.72■■■□□ 2.03
SMC2O95347 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC27.72■■■□□ 2.03
SMC2O95347 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC27.72■■■□□ 2.03
SMC2O95347 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.72■■■□□ 2.03
SMC2O95347 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.72■■■□□ 2.03
SMC2O95347 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC27.72■■■□□ 2.03
SMC2O95347 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC27.71■■■□□ 2.03
SMC2O95347 AC145676.1-201ENST00000514988 2004 ntBASIC27.71■■■□□ 2.03
SMC2O95347 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SMC2O95347 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC27.7■■■□□ 2.02
SMC2O95347 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC27.69■■■□□ 2.02
SMC2O95347 HGH1-207ENST00000628266 258 ntTSL 5 BASIC27.69■■■□□ 2.02
SMC2O95347 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC27.69■■■□□ 2.02
SMC2O95347 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC27.69■■■□□ 2.02
SMC2O95347 SLC35A2-207ENST00000445167 1739 ntTSL 1 (best) BASIC27.69■■■□□ 2.02
SMC2O95347 AC142472.1-201ENST00000612013 1741 ntBASIC27.69■■■□□ 2.02
SMC2O95347 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.68■■■□□ 2.02
SMC2O95347 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC2O95347 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC27.68■■■□□ 2.02
SMC2O95347 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC27.68■■■□□ 2.02
SMC2O95347 RPS2P35-201ENST00000443417 897 ntBASIC27.67■■■□□ 2.02
SMC2O95347 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC27.67■■■□□ 2.02
SMC2O95347 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC27.67■■■□□ 2.02
SMC2O95347 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC27.67■■■□□ 2.02
SMC2O95347 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.66■■■□□ 2.02
SMC2O95347 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMC2O95347 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC27.66■■■□□ 2.02
SMC2O95347 LINC01971-201ENST00000617888 1048 ntBASIC27.65■■■□□ 2.02
SMC2O95347 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC27.65■■■□□ 2.02
SMC2O95347 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC27.64■■■□□ 2.02
SMC2O95347 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC27.64■■■□□ 2.02
SMC2O95347 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC27.64■■■□□ 2.02
SMC2O95347 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.64■■■□□ 2.02
SMC2O95347 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC27.64■■■□□ 2.01
SMC2O95347 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC27.64■■■□□ 2.01
SMC2O95347 CTF1-202ENST00000395019 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC2O95347 AC020928.2-201ENST00000588717 2197 ntBASIC27.63■■■□□ 2.01
SMC2O95347 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SMC2O95347 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC27.63■■■□□ 2.01
SMC2O95347 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC27.63■■■□□ 2.01
SMC2O95347 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMC2O95347 AC092803.2-201ENST00000564287 1899 ntBASIC27.62■■■□□ 2.01
SMC2O95347 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC27.62■■■□□ 2.01
SMC2O95347 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC27.62■■■□□ 2.01
SMC2O95347 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMC2O95347 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SMC2O95347 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC27.61■■■□□ 2.01
SMC2O95347 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMC2O95347 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC27.61■■■□□ 2.01
SMC2O95347 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC27.61■■■□□ 2.01
SMC2O95347 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC27.6■■■□□ 2.01
SMC2O95347 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC27.6■■■□□ 2.01
SMC2O95347 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC2O95347 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC27.59■■■□□ 2.01
SMC2O95347 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC2O95347 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC27.59■■■□□ 2.01
SMC2O95347 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC2O95347 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SMC2O95347 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC2O95347 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC2O95347 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC27.58■■■□□ 2.01
SMC2O95347 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SMC2O95347 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC27.58■■■□□ 2.01
SMC2O95347 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC27.57■■■□□ 2
SMC2O95347 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.57■■■□□ 2
SMC2O95347 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC27.57■■■□□ 2
SMC2O95347 DUX4L13-201ENST00000554103 1267 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L15-201ENST00000611059 1267 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L23-201ENST00000615195 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L24-201ENST00000617576 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L22-201ENST00000618238 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L20-201ENST00000619712 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L21-201ENST00000622058 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L10-201ENST00000622460 1267 ntBASIC27.57■■■□□ 2
SMC2O95347 DUX4L25-201ENST00000624915 1269 ntBASIC27.57■■■□□ 2
SMC2O95347 DUSP8P4-201ENST00000399538 1761 ntBASIC27.57■■■□□ 2
SMC2O95347 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC27.57■■■□□ 2
SMC2O95347 PKM-204ENST00000449901 2526 ntTSL 2 BASIC27.57■■■□□ 2
SMC2O95347 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC27.57■■■□□ 2
SMC2O95347 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC27.56■■■□□ 2
SMC2O95347 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC27.56■■■□□ 2
SMC2O95347 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.55■■■□□ 2
SMC2O95347 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC27.55■■■□□ 2
SMC2O95347 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
SMC2O95347 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC27.55■■■□□ 2
SMC2O95347 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC27.55■■■□□ 2
SMC2O95347 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SMC2O95347 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC27.55■■■□□ 2
SMC2O95347 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC27.55■■■□□ 2
SMC2O95347 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC27.54■■■□□ 2
SMC2O95347 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC27.54■■■□□ 2
SMC2O95347 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC27.54■■■□□ 2
SMC2O95347 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.54■■■□□ 2
SMC2O95347 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC27.54■■■□□ 2
SMC2O95347 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC27.54■■■□□ 2
Retrieved 100 of 98,524 protein–RNA pairs in 61.3 ms