Protein–RNA interactions for Protein: O88551

Cldn1, Claudin-1, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn1O88551 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.24■□□□□ 0.67
Cldn1O88551 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn1O88551 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn1O88551 0610009L18Rik-201ENSMUST00000143813 619 ntTSL 2 BASIC19.23■□□□□ 0.67
Cldn1O88551 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Cldn1O88551 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Cldn1O88551 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn1O88551 Nsd1-203ENSMUST00000224156 1149 ntBASIC19.22■□□□□ 0.67
Cldn1O88551 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn1O88551 A930002H24Rik-201ENSMUST00000050753 492 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn1O88551 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Cldn1O88551 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Cldn1O88551 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn1O88551 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Cldn1O88551 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn1O88551 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.21■□□□□ 0.67
Cldn1O88551 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
Cldn1O88551 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn1O88551 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Cldn1O88551 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC19.2■□□□□ 0.66
Cldn1O88551 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Cldn1O88551 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Gm43566-201ENSMUST00000196851 808 ntBASIC19.2■□□□□ 0.66
Cldn1O88551 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Qk-202ENSMUST00000097414 4658 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Cldn1O88551 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
Cldn1O88551 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn1O88551 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn1O88551 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn1O88551 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cldn1O88551 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
Cldn1O88551 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Cldn1O88551 Cdkn2d-203ENSMUST00000215619 1423 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn1O88551 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC19.18■□□□□ 0.66
Cldn1O88551 Rps19-202ENSMUST00000108429 633 ntAPPRIS P1 TSL 2 BASIC19.18■□□□□ 0.66
Cldn1O88551 Arpp19-206ENSMUST00000168301 599 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn1O88551 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.18■□□□□ 0.66
Cldn1O88551 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Cldn1O88551 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn1O88551 Vax1-201ENSMUST00000172821 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Cldn1O88551 Gm44428-201ENSMUST00000204474 874 ntBASIC19.17■□□□□ 0.66
Cldn1O88551 Fezf2-202ENSMUST00000224023 1917 ntBASIC19.17■□□□□ 0.66
Cldn1O88551 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Cldn1O88551 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn1O88551 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn1O88551 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Cldn1O88551 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.15■□□□□ 0.66
Cldn1O88551 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
Cldn1O88551 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn1O88551 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
Cldn1O88551 Pde6d-203ENSMUST00000146220 879 ntTSL 2 BASIC19.15■□□□□ 0.66
Cldn1O88551 Gm28417-202ENSMUST00000185881 538 ntTSL 3 BASIC19.15■□□□□ 0.66
Cldn1O88551 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn1O88551 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn1O88551 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Cldn1O88551 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn1O88551 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
Cldn1O88551 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC19.14■□□□□ 0.65
Cldn1O88551 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Cldn1O88551 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn1O88551 Gm43592-201ENSMUST00000196922 1165 ntBASIC19.13■□□□□ 0.65
Cldn1O88551 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn1O88551 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn1O88551 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn1O88551 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Cldn1O88551 Tmem238-201ENSMUST00000168578 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn1O88551 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
Cldn1O88551 Gm45444-201ENSMUST00000211394 898 ntBASIC19.12■□□□□ 0.65
Cldn1O88551 Gm9959-201ENSMUST00000068277 390 ntBASIC19.12■□□□□ 0.65
Cldn1O88551 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
Cldn1O88551 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn1O88551 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
Cldn1O88551 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC19.1■□□□□ 0.65
Cldn1O88551 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.1■□□□□ 0.65
Cldn1O88551 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn1O88551 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn1O88551 Jdp2-201ENSMUST00000050687 1643 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn1O88551 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Cldn1O88551 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.09■□□□□ 0.65
Cldn1O88551 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cldn1O88551 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC19.09■□□□□ 0.65
Cldn1O88551 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Cldn1O88551 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
Cldn1O88551 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.65
Cldn1O88551 Gm16599-201ENSMUST00000148082 1182 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn1O88551 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.08■□□□□ 0.64
Cldn1O88551 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn1O88551 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC19.08■□□□□ 0.64
Cldn1O88551 Ube2k-206ENSMUST00000201984 1449 ntTSL 3 BASIC19.08■□□□□ 0.64
Cldn1O88551 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
Cldn1O88551 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn1O88551 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC19.07■□□□□ 0.64
Cldn1O88551 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn1O88551 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
Cldn1O88551 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
Cldn1O88551 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms