Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC11.38□□□□□ -0.59
USH2AO75445 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
USH2AO75445 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC11.38□□□□□ -0.59
USH2AO75445 EBPL-204ENST00000378272 766 ntTSL 3 BASIC11.37□□□□□ -0.59
USH2AO75445 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC11.37□□□□□ -0.59
USH2AO75445 AC026271.2-201ENST00000428091 497 ntBASIC11.37□□□□□ -0.59
USH2AO75445 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
USH2AO75445 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC11.37□□□□□ -0.59
USH2AO75445 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 HYI-210ENST00000486909 905 ntTSL 5 BASIC11.37□□□□□ -0.59
USH2AO75445 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC11.37□□□□□ -0.59
USH2AO75445 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
USH2AO75445 AC110285.6-201ENST00000617652 491 ntBASIC11.37□□□□□ -0.59
USH2AO75445 AC096631.2-201ENST00000436136 790 ntBASIC11.36□□□□□ -0.59
USH2AO75445 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 MAST4-205ENST00000406039 717 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 AC104564.3-201ENST00000582367 638 ntBASIC11.36□□□□□ -0.59
USH2AO75445 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
USH2AO75445 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC11.36□□□□□ -0.59
USH2AO75445 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
USH2AO75445 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC11.35□□□□□ -0.59
USH2AO75445 KRT125P-201ENST00000546827 989 ntBASIC11.35□□□□□ -0.59
USH2AO75445 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
USH2AO75445 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
USH2AO75445 RIPPLY2-202ENST00000369689 664 ntAPPRIS P2 TSL 1 (best) BASIC11.35□□□□□ -0.59
USH2AO75445 AL136116.3-201ENST00000402907 1138 ntBASIC11.35□□□□□ -0.59
USH2AO75445 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC11.35□□□□□ -0.59
USH2AO75445 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
USH2AO75445 MIR4787-201ENST00000607364 84 ntBASIC11.34□□□□□ -0.59
USH2AO75445 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC11.34□□□□□ -0.59
USH2AO75445 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC11.34□□□□□ -0.59
USH2AO75445 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC11.34□□□□□ -0.59
USH2AO75445 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.34□□□□□ -0.59
USH2AO75445 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC11.34□□□□□ -0.59
USH2AO75445 AL359258.2-201ENST00000564063 1566 ntBASIC11.34□□□□□ -0.59
USH2AO75445 AC135279.3-201ENST00000610945 1311 ntBASIC11.34□□□□□ -0.59
USH2AO75445 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC11.33□□□□□ -0.59
USH2AO75445 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC11.33□□□□□ -0.6
USH2AO75445 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
USH2AO75445 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
USH2AO75445 RNASET2-210ENST00000508775 1375 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
USH2AO75445 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC11.33□□□□□ -0.6
USH2AO75445 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
USH2AO75445 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
USH2AO75445 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
USH2AO75445 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
USH2AO75445 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC11.32□□□□□ -0.6
USH2AO75445 AC093536.1-201ENST00000569153 554 ntBASIC11.32□□□□□ -0.6
USH2AO75445 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
USH2AO75445 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
USH2AO75445 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
USH2AO75445 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
USH2AO75445 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC11.32□□□□□ -0.6
USH2AO75445 KRTAP5-1-201ENST00000382171 942 ntAPPRIS P1 BASIC11.32□□□□□ -0.6
USH2AO75445 MIR5787-201ENST00000611784 55 ntBASIC11.32□□□□□ -0.6
USH2AO75445 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC11.31□□□□□ -0.6
USH2AO75445 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC11.31□□□□□ -0.6
USH2AO75445 TMEM171-202ENST00000454765 1535 ntAPPRIS P3 TSL 1 (best) BASIC11.31□□□□□ -0.6
USH2AO75445 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC11.31□□□□□ -0.6
USH2AO75445 RPP21-222ENST00000433076 577 ntTSL 2 BASIC11.31□□□□□ -0.6
USH2AO75445 AC133561.4-201ENST00000566112 224 ntBASIC11.31□□□□□ -0.6
USH2AO75445 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
USH2AO75445 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC11.31□□□□□ -0.6
USH2AO75445 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
USH2AO75445 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC11.31□□□□□ -0.6
USH2AO75445 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC11.31□□□□□ -0.6
USH2AO75445 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC11.31□□□□□ -0.6
USH2AO75445 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC11.3□□□□□ -0.6
USH2AO75445 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC11.3□□□□□ -0.6
USH2AO75445 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC11.3□□□□□ -0.6
USH2AO75445 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC11.3□□□□□ -0.6
USH2AO75445 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC11.3□□□□□ -0.6
USH2AO75445 MIR4466-201ENST00000606121 54 ntBASIC11.29□□□□□ -0.6
USH2AO75445 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
USH2AO75445 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
USH2AO75445 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.29□□□□□ -0.6
USH2AO75445 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
USH2AO75445 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
USH2AO75445 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms