Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Sec63-201ENSMUST00000019937 6032 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Pdlim1O70400 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Pdlim1O70400 Mir6538-201ENSMUST00000183713 110 ntBASIC22.32■■□□□ 1.16
Pdlim1O70400 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim1O70400 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim1O70400 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim1O70400 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim1O70400 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Pdlim1O70400 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Pdlim1O70400 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim1O70400 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim1O70400 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.29■■□□□ 1.16
Pdlim1O70400 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim1O70400 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Pdlim1O70400 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC22.28■■□□□ 1.16
Pdlim1O70400 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim1O70400 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
Pdlim1O70400 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim1O70400 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Pdlim1O70400 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
Pdlim1O70400 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22.27■■□□□ 1.16
Pdlim1O70400 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC22.27■■□□□ 1.16
Pdlim1O70400 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim1O70400 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim1O70400 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim1O70400 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Pdlim1O70400 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Pdlim1O70400 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC22.26■■□□□ 1.15
Pdlim1O70400 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim1O70400 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim1O70400 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Pdlim1O70400 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim1O70400 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Pdlim1O70400 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
Pdlim1O70400 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim1O70400 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Pdlim1O70400 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim1O70400 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Pdlim1O70400 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
Pdlim1O70400 Gm44428-201ENSMUST00000204474 874 ntBASIC22.23■■□□□ 1.15
Pdlim1O70400 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim1O70400 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim1O70400 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.23■■□□□ 1.15
Pdlim1O70400 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC22.23■■□□□ 1.15
Pdlim1O70400 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim1O70400 Pdlim4-201ENSMUST00000018755 1182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim1O70400 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim1O70400 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Pdlim1O70400 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim1O70400 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim1O70400 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim1O70400 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC22.21■■□□□ 1.15
Pdlim1O70400 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC22.21■■□□□ 1.15
Pdlim1O70400 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Pdlim1O70400 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim1O70400 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim1O70400 Arhgap9-201ENSMUST00000069548 1782 ntAPPRIS P2 TSL 1 (best) BASIC22.2■■□□□ 1.14
Pdlim1O70400 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Pdlim1O70400 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim1O70400 Tmem221-201ENSMUST00000052072 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim1O70400 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Pdlim1O70400 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim1O70400 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim1O70400 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Pdlim1O70400 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim1O70400 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Pdlim1O70400 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC22.17■■□□□ 1.14
Pdlim1O70400 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Pdlim1O70400 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC22.17■■□□□ 1.14
Pdlim1O70400 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Pdlim1O70400 Gm20458-201ENSMUST00000164863 1369 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Pdlim1O70400 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.15■■□□□ 1.14
Pdlim1O70400 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC22.15■■□□□ 1.14
Pdlim1O70400 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC22.15■■□□□ 1.14
Pdlim1O70400 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Pdlim1O70400 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.14■■□□□ 1.13
Pdlim1O70400 Gm7199-201ENSMUST00000118327 1485 ntBASIC22.14■■□□□ 1.13
Pdlim1O70400 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Pdlim1O70400 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC22.14■■□□□ 1.13
Pdlim1O70400 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC22.13■■□□□ 1.13
Pdlim1O70400 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim1O70400 Timm50-201ENSMUST00000081946 1515 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim1O70400 Kiss1-202ENSMUST00000178033 496 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim1O70400 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Pdlim1O70400 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Pdlim1O70400 Cbln1-202ENSMUST00000169693 1699 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
Pdlim1O70400 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Pdlim1O70400 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Pdlim1O70400 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Pdlim1O70400 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC22.11■■□□□ 1.13
Pdlim1O70400 Npas1-202ENSMUST00000210748 1959 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdlim1O70400 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pdlim1O70400 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC22.1■■□□□ 1.13
Pdlim1O70400 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC22.1■■□□□ 1.13
Pdlim1O70400 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.1■■□□□ 1.13
Pdlim1O70400 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
Pdlim1O70400 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim1O70400 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim1O70400 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Pdlim1O70400 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms