Protein–RNA interactions for Protein: O55057

Pde6d, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, mousemouse

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6dO55057 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.8■□□□□ 0.44
Pde6dO55057 Fgf20-201ENSMUST00000034014 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Magi3-202ENSMUST00000121198 5912 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Pde6dO55057 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Pde6dO55057 Exosc6-201ENSMUST00000210390 1326 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Pde6dO55057 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Pde6dO55057 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6dO55057 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Pde6dO55057 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6dO55057 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6dO55057 Macrod2-207ENSMUST00000110067 4730 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Pde6dO55057 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Pde6dO55057 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.78■□□□□ 0.44
Pde6dO55057 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 Pcmtd1-201ENSMUST00000061280 5232 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Pde6dO55057 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pde6dO55057 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Pde6dO55057 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6dO55057 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6dO55057 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6dO55057 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Pde6dO55057 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Pde6dO55057 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC17.75■□□□□ 0.43
Pde6dO55057 Gm6277-202ENSMUST00000224036 2779 ntBASIC17.74■□□□□ 0.43
Pde6dO55057 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Pde6dO55057 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Pde6dO55057 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC17.74■□□□□ 0.43
Pde6dO55057 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Pde6dO55057 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6dO55057 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6dO55057 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Pde6dO55057 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Pde6dO55057 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Pde6dO55057 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Pde6dO55057 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6dO55057 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6dO55057 Macrod2-205ENSMUST00000110063 845 ntTSL 5 BASIC17.71■□□□□ 0.43
Pde6dO55057 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6dO55057 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6dO55057 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Pde6dO55057 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
Pde6dO55057 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Pde6dO55057 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC17.7■□□□□ 0.42
Pde6dO55057 Gm26766-202ENSMUST00000227544 2347 ntBASIC17.7■□□□□ 0.42
Pde6dO55057 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
Pde6dO55057 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Homer1-207ENSMUST00000109494 2468 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 5031439G07Rik-203ENSMUST00000165743 5032 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Hrh3-208ENSMUST00000171736 906 ntTSL 5 BASIC17.7■□□□□ 0.42
Pde6dO55057 Elavl1-201ENSMUST00000098950 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Pde6dO55057 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Pde6dO55057 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Pde6dO55057 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6dO55057 Coq10a-207ENSMUST00000220227 1434 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Pde6dO55057 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6dO55057 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Pde6dO55057 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
Pde6dO55057 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
Pde6dO55057 Il17d-201ENSMUST00000089494 1274 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
Pde6dO55057 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Pde6dO55057 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6dO55057 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6dO55057 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC17.66■□□□□ 0.42
Pde6dO55057 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
Pde6dO55057 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6dO55057 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Pde6dO55057 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6dO55057 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6dO55057 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6dO55057 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC17.65■□□□□ 0.42
Pde6dO55057 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6dO55057 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Pde6dO55057 Antxr1-204ENSMUST00000204805 2156 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Pde6dO55057 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms