Protein–RNA interactions for Protein: O55042

Snca, Alpha-synuclein, mousemouse

Known RBP Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SncaO55042 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
SncaO55042 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
SncaO55042 Gm42809-201ENSMUST00000198429 1138 ntBASIC18.51■□□□□ 0.55
SncaO55042 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
SncaO55042 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.51■□□□□ 0.55
SncaO55042 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
SncaO55042 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
SncaO55042 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
SncaO55042 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
SncaO55042 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SncaO55042 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC18.5■□□□□ 0.55
SncaO55042 Pds5a-209ENSMUST00000201948 8934 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
SncaO55042 Gng12-204ENSMUST00000114225 1876 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
SncaO55042 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
SncaO55042 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SncaO55042 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
SncaO55042 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
SncaO55042 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
SncaO55042 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SncaO55042 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SncaO55042 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SncaO55042 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
SncaO55042 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
SncaO55042 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SncaO55042 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC18.47■□□□□ 0.55
SncaO55042 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC18.47■□□□□ 0.55
SncaO55042 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SncaO55042 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
SncaO55042 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SncaO55042 Gm37136-201ENSMUST00000194368 194 ntBASIC18.46■□□□□ 0.55
SncaO55042 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC18.46■□□□□ 0.55
SncaO55042 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC18.45■□□□□ 0.54
SncaO55042 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC18.45■□□□□ 0.54
SncaO55042 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SncaO55042 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SncaO55042 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SncaO55042 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SncaO55042 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC18.45■□□□□ 0.54
SncaO55042 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SncaO55042 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SncaO55042 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.44■□□□□ 0.54
SncaO55042 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SncaO55042 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC18.44■□□□□ 0.54
SncaO55042 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
SncaO55042 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SncaO55042 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
SncaO55042 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
SncaO55042 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
SncaO55042 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC18.41■□□□□ 0.54
SncaO55042 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC18.41■□□□□ 0.54
SncaO55042 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
SncaO55042 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SncaO55042 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC18.41■□□□□ 0.54
SncaO55042 Gm9939-201ENSMUST00000067161 1154 ntBASIC18.41■□□□□ 0.54
SncaO55042 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
SncaO55042 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC18.4■□□□□ 0.54
SncaO55042 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SncaO55042 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SncaO55042 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
SncaO55042 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
SncaO55042 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SncaO55042 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
SncaO55042 Gm20634-201ENSMUST00000090779 2956 ntBASIC18.39■□□□□ 0.54
SncaO55042 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
SncaO55042 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
SncaO55042 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SncaO55042 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
SncaO55042 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
SncaO55042 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC18.39■□□□□ 0.53
SncaO55042 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
SncaO55042 Gm6821-201ENSMUST00000107540 542 ntBASIC18.38■□□□□ 0.53
SncaO55042 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC18.38■□□□□ 0.53
SncaO55042 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SncaO55042 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
SncaO55042 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
SncaO55042 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SncaO55042 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SncaO55042 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
SncaO55042 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 Tm9sf3-201ENSMUST00000025989 6144 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC18.36■□□□□ 0.53
SncaO55042 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
SncaO55042 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SncaO55042 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SncaO55042 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
SncaO55042 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
SncaO55042 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SncaO55042 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SncaO55042 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SncaO55042 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SncaO55042 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SncaO55042 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 91.9 ms