Protein–RNA interactions for Protein: O43325

LYRM1, LYR motif-containing protein 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM1O43325 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
LYRM1O43325 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYRM1O43325 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC21.27■■□□□ 1
LYRM1O43325 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
LYRM1O43325 CEBPB-AS1-201ENST00000613921 2648 ntTSL 3 BASIC21.26■□□□□ 0.99
LYRM1O43325 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC21.26■□□□□ 0.99
LYRM1O43325 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC21.26■□□□□ 0.99
LYRM1O43325 AC142381.3-201ENST00000568208 1670 ntBASIC21.26■□□□□ 0.99
LYRM1O43325 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
LYRM1O43325 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
LYRM1O43325 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYRM1O43325 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
LYRM1O43325 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC21.25■□□□□ 0.99
LYRM1O43325 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LYRM1O43325 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
LYRM1O43325 FAAP20-204ENST00000400919 1413 ntTSL 3 BASIC21.25■□□□□ 0.99
LYRM1O43325 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LYRM1O43325 AC006077.2-201ENST00000623591 457 ntBASIC21.25■□□□□ 0.99
LYRM1O43325 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
LYRM1O43325 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYRM1O43325 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.24■□□□□ 0.99
LYRM1O43325 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
LYRM1O43325 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
LYRM1O43325 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LYRM1O43325 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LYRM1O43325 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYRM1O43325 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC21.23■□□□□ 0.99
LYRM1O43325 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LYRM1O43325 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
LYRM1O43325 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC21.22■□□□□ 0.99
LYRM1O43325 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYRM1O43325 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC21.22■□□□□ 0.99
LYRM1O43325 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LYRM1O43325 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC21.22■□□□□ 0.99
LYRM1O43325 MED17-227ENST00000640521 2047 ntTSL 5 BASIC21.21■□□□□ 0.99
LYRM1O43325 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
LYRM1O43325 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYRM1O43325 AL139125.2-201ENST00000623134 1869 ntBASIC21.21■□□□□ 0.99
LYRM1O43325 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
LYRM1O43325 AP004609.3-201ENST00000610705 1884 ntBASIC21.2■□□□□ 0.98
LYRM1O43325 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
LYRM1O43325 PRDM13-202ENST00000369215 2429 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 DTNB-201ENST00000288642 2464 ntAPPRIS ALT2 TSL 2 BASIC21.19■□□□□ 0.98
LYRM1O43325 DTNB-208ENST00000406818 2474 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
LYRM1O43325 FBXL20-203ENST00000577399 1620 ntTSL 5 BASIC21.18■□□□□ 0.98
LYRM1O43325 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC21.18■□□□□ 0.98
LYRM1O43325 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYRM1O43325 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYRM1O43325 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LYRM1O43325 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
LYRM1O43325 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
LYRM1O43325 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.17■□□□□ 0.98
LYRM1O43325 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYRM1O43325 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYRM1O43325 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
LYRM1O43325 AL031258.1-201ENST00000623562 325 ntBASIC21.17■□□□□ 0.98
LYRM1O43325 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC21.17■□□□□ 0.98
LYRM1O43325 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LYRM1O43325 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LYRM1O43325 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYRM1O43325 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYRM1O43325 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYRM1O43325 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LYRM1O43325 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC21.16■□□□□ 0.98
LYRM1O43325 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.15■□□□□ 0.98
LYRM1O43325 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LYRM1O43325 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.15■□□□□ 0.98
LYRM1O43325 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC21.15■□□□□ 0.98
LYRM1O43325 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC21.14■□□□□ 0.97
LYRM1O43325 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
LYRM1O43325 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 ARHGEF35-201ENST00000378115 2431 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
LYRM1O43325 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYRM1O43325 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
LYRM1O43325 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYRM1O43325 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
LYRM1O43325 LINC00543-201ENST00000567234 1845 ntBASIC21.12■□□□□ 0.97
LYRM1O43325 AL357033.1-201ENST00000370520 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
LYRM1O43325 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYRM1O43325 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC21.11■□□□□ 0.97
LYRM1O43325 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYRM1O43325 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
LYRM1O43325 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC21.11■□□□□ 0.97
LYRM1O43325 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC21.11■□□□□ 0.97
LYRM1O43325 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.97
LYRM1O43325 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC21.11■□□□□ 0.97
LYRM1O43325 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC21.1■□□□□ 0.97
LYRM1O43325 AC138932.3-201ENST00000567634 1902 ntBASIC21.1■□□□□ 0.97
LYRM1O43325 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 155.1 ms