Protein–RNA interactions for Protein: O15353

FOXN1, Forkhead box protein N1, humanhuman

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN1O15353 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC29.73■■■□□ 2.35
FOXN1O15353 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC29.73■■■□□ 2.35
FOXN1O15353 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
FOXN1O15353 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC29.73■■■□□ 2.35
FOXN1O15353 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC29.73■■■□□ 2.35
FOXN1O15353 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC29.73■■■□□ 2.35
FOXN1O15353 PVT1_1.1-201ENST00000615125 194 ntBASIC29.73■■■□□ 2.35
FOXN1O15353 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
FOXN1O15353 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
FOXN1O15353 PRTG-204ENST00000561292 833 ntTSL 3 BASIC29.72■■■□□ 2.35
FOXN1O15353 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC29.72■■■□□ 2.35
FOXN1O15353 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
FOXN1O15353 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC29.71■■■□□ 2.35
FOXN1O15353 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
FOXN1O15353 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC29.71■■■□□ 2.35
FOXN1O15353 AC092666.2-201ENST00000613287 246 ntBASIC29.71■■■□□ 2.35
FOXN1O15353 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC29.71■■■□□ 2.35
FOXN1O15353 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC29.71■■■□□ 2.35
FOXN1O15353 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC29.7■■■□□ 2.35
FOXN1O15353 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC29.7■■■□□ 2.35
FOXN1O15353 AC126177.7-201ENST00000547904 679 ntBASIC29.7■■■□□ 2.35
FOXN1O15353 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
FOXN1O15353 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
FOXN1O15353 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC29.69■■■□□ 2.34
FOXN1O15353 AC139795.1-202ENST00000500444 432 ntBASIC29.69■■■□□ 2.34
FOXN1O15353 MED25-210ENST00000612854 801 ntTSL 5 BASIC29.69■■■□□ 2.34
FOXN1O15353 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC29.69■■■□□ 2.34
FOXN1O15353 MED25-214ENST00000622402 642 ntTSL 5 BASIC29.69■■■□□ 2.34
FOXN1O15353 AC110285.7-201ENST00000624417 1536 ntBASIC29.69■■■□□ 2.34
FOXN1O15353 REST-210ENST00000638187 1334 ntTSL 5 BASIC29.69■■■□□ 2.34
FOXN1O15353 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC29.68■■■□□ 2.34
FOXN1O15353 TYMP-201ENST00000252029 1630 ntAPPRIS P3 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXN1O15353 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC29.68■■■□□ 2.34
FOXN1O15353 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC29.68■■■□□ 2.34
FOXN1O15353 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
FOXN1O15353 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC29.67■■■□□ 2.34
FOXN1O15353 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC29.67■■■□□ 2.34
FOXN1O15353 AC026202.3-201ENST00000600805 1127 ntBASIC29.67■■■□□ 2.34
FOXN1O15353 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC29.67■■■□□ 2.34
FOXN1O15353 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC29.67■■■□□ 2.34
FOXN1O15353 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
FOXN1O15353 SPCS2P3-201ENST00000500401 656 ntBASIC29.66■■■□□ 2.34
FOXN1O15353 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC29.66■■■□□ 2.34
FOXN1O15353 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
FOXN1O15353 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC29.66■■■□□ 2.34
FOXN1O15353 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC29.65■■■□□ 2.34
FOXN1O15353 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC29.65■■■□□ 2.34
FOXN1O15353 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC29.65■■■□□ 2.34
FOXN1O15353 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC29.64■■■□□ 2.34
FOXN1O15353 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.64■■■□□ 2.34
FOXN1O15353 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC29.64■■■□□ 2.33
FOXN1O15353 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
FOXN1O15353 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC29.63■■■□□ 2.33
FOXN1O15353 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC29.63■■■□□ 2.33
FOXN1O15353 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC29.63■■■□□ 2.33
FOXN1O15353 MIR6765-201ENST00000614092 87 ntBASIC29.63■■■□□ 2.33
FOXN1O15353 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
FOXN1O15353 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.62■■■□□ 2.33
FOXN1O15353 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
FOXN1O15353 MIR4508-201ENST00000584178 70 ntBASIC29.62■■■□□ 2.33
FOXN1O15353 RALB-208ENST00000631312 311 ntTSL 5 BASIC29.62■■■□□ 2.33
FOXN1O15353 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC29.62■■■□□ 2.33
FOXN1O15353 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC29.62■■■□□ 2.33
FOXN1O15353 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
FOXN1O15353 WHAMMP2-203ENST00000563942 1603 ntBASIC29.61■■■□□ 2.33
FOXN1O15353 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC29.61■■■□□ 2.33
FOXN1O15353 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC29.61■■■□□ 2.33
FOXN1O15353 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC29.61■■■□□ 2.33
FOXN1O15353 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC29.6■■■□□ 2.33
FOXN1O15353 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC29.6■■■□□ 2.33
FOXN1O15353 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC29.6■■■□□ 2.33
FOXN1O15353 GRAMD4P7-201ENST00000578182 1232 ntBASIC29.6■■■□□ 2.33
FOXN1O15353 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC29.59■■■□□ 2.33
FOXN1O15353 AC239859.2-201ENST00000444165 318 ntBASIC29.59■■■□□ 2.33
FOXN1O15353 AL031848.2-201ENST00000607670 837 ntBASIC29.59■■■□□ 2.33
FOXN1O15353 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
FOXN1O15353 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC29.59■■■□□ 2.33
FOXN1O15353 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC29.59■■■□□ 2.33
FOXN1O15353 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
FOXN1O15353 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC29.58■■■□□ 2.33
FOXN1O15353 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC29.58■■■□□ 2.33
FOXN1O15353 AC103724.3-201ENST00000564481 992 ntBASIC29.58■■■□□ 2.33
FOXN1O15353 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
FOXN1O15353 AL139246.5-201ENST00000606645 996 ntBASIC29.56■■■□□ 2.32
FOXN1O15353 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
FOXN1O15353 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXN1O15353 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.55■■■□□ 2.32
FOXN1O15353 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC29.55■■■□□ 2.32
FOXN1O15353 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC29.55■■■□□ 2.32
FOXN1O15353 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
FOXN1O15353 AC135983.2-203ENST00000454486 1613 ntBASIC29.54■■■□□ 2.32
FOXN1O15353 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXN1O15353 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXN1O15353 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXN1O15353 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC29.54■■■□□ 2.32
FOXN1O15353 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC29.53■■■□□ 2.32
FOXN1O15353 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC29.53■■■□□ 2.32
FOXN1O15353 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC29.53■■■□□ 2.32
FOXN1O15353 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC29.53■■■□□ 2.32
FOXN1O15353 SMPD5-203ENST00000639008 1464 ntBASIC29.53■■■□□ 2.32
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms