Protein–RNA interactions for Protein: J3QNG1

Gm6408, Predicted gene 6408, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm6408J3QNG1 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Gm6408J3QNG1 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
Gm6408J3QNG1 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 Slc30a3-201ENSMUST00000031037 2089 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Gm6408J3QNG1 C2cd4b-201ENSMUST00000171652 1327 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
Gm6408J3QNG1 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Gm6408J3QNG1 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.39■■□□□ 1.17
Gm6408J3QNG1 Manf-202ENSMUST00000159283 2247 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Gm6408J3QNG1 Snx7-201ENSMUST00000029639 2021 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Mta3-204ENSMUST00000112352 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Lrrc59-201ENSMUST00000021239 2837 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Gm6408J3QNG1 Flot2-201ENSMUST00000072289 2621 ntAPPRIS P2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm6408J3QNG1 Prph-201ENSMUST00000024249 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm6408J3QNG1 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm6408J3QNG1 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Gm6408J3QNG1 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.36■■□□□ 1.17
Gm6408J3QNG1 Gm4799-201ENSMUST00000095396 657 ntBASIC22.36■■□□□ 1.17
Gm6408J3QNG1 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
Gm6408J3QNG1 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.35■■□□□ 1.17
Gm6408J3QNG1 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.34■■□□□ 1.17
Gm6408J3QNG1 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm6408J3QNG1 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Gm6408J3QNG1 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC22.34■■□□□ 1.17
Gm6408J3QNG1 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
Gm6408J3QNG1 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.32■■□□□ 1.16
Gm6408J3QNG1 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm6408J3QNG1 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
Gm6408J3QNG1 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Gm6408J3QNG1 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Gm6408J3QNG1 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
Gm6408J3QNG1 Ubl3-204ENSMUST00000201595 2064 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
Gm6408J3QNG1 1700084E18Rik-202ENSMUST00000205624 729 ntBASIC22.31■■□□□ 1.16
Gm6408J3QNG1 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm6408J3QNG1 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.31■■□□□ 1.16
Gm6408J3QNG1 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
Gm6408J3QNG1 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC22.31■■□□□ 1.16
Gm6408J3QNG1 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 AC061963.1-201ENSMUST00000213180 1765 ntTSL 5 BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Gm6408J3QNG1 Gimap1-205ENSMUST00000204168 1469 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Bcl7b-202ENSMUST00000111187 564 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Gm6408J3QNG1 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.28■■□□□ 1.16
Gm6408J3QNG1 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC22.28■■□□□ 1.16
Gm6408J3QNG1 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Gm6408J3QNG1 Rab3il1-202ENSMUST00000117641 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm6408J3QNG1 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Gm6408J3QNG1 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Gm7432-201ENSMUST00000210343 879 ntBASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Rexo2-210ENSMUST00000217037 609 ntTSL 3 BASIC22.27■■□□□ 1.16
Gm6408J3QNG1 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Gm11542-201ENSMUST00000126480 1511 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Gm6408J3QNG1 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
Gm6408J3QNG1 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
Gm6408J3QNG1 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Gm6408J3QNG1 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Gm6408J3QNG1 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm6408J3QNG1 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Gm6408J3QNG1 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC22.24■■□□□ 1.15
Gm6408J3QNG1 Hspb1-202ENSMUST00000111155 930 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm6408J3QNG1 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Gm6408J3QNG1 Tmed2-201ENSMUST00000060226 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Mir3960-201ENSMUST00000198213 73 ntBASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Gm9812-201ENSMUST00000061934 968 ntBASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Syce2-202ENSMUST00000136026 1686 ntAPPRIS P3 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Plpp5-201ENSMUST00000068916 1483 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Gm6408J3QNG1 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm6408J3QNG1 St7-207ENSMUST00000115418 1678 ntTSL 5 BASIC22.21■■□□□ 1.15
Gm6408J3QNG1 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm6408J3QNG1 Gm11599-201ENSMUST00000118720 878 ntBASIC22.21■■□□□ 1.15
Gm6408J3QNG1 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC22.21■■□□□ 1.15
Gm6408J3QNG1 AC164433.2-201ENSMUST00000226346 1701 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 10.1 ms