Protein–RNA interactions for Protein: D3Z6J4

Vpreb3, Pre-B lymphocyte gene 3, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vpreb3D3Z6J4 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vpreb3D3Z6J4 Cep170b-202ENSMUST00000101018 6641 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vpreb3D3Z6J4 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vpreb3D3Z6J4 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC14.23□□□□□ -0.13
Vpreb3D3Z6J4 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 Fam20b-201ENSMUST00000086153 4414 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vpreb3D3Z6J4 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vpreb3D3Z6J4 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vpreb3D3Z6J4 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Vpreb3D3Z6J4 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vpreb3D3Z6J4 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.21□□□□□ -0.14
Vpreb3D3Z6J4 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Vpreb3D3Z6J4 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vpreb3D3Z6J4 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vpreb3D3Z6J4 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Cobll1-204ENSMUST00000112430 4917 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Chsy1-201ENSMUST00000036372 4176 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Vpreb3D3Z6J4 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Dlg3-202ENSMUST00000087984 4956 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Vpreb3D3Z6J4 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Atp8b2-202ENSMUST00000107396 5705 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Lgr4-201ENSMUST00000046548 5060 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Vpreb3D3Z6J4 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Ppp3ca-202ENSMUST00000070198 4758 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Hunk-201ENSMUST00000065856 5009 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Gm30023-201ENSMUST00000197970 889 ntBASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Gm17641-201ENSMUST00000166328 2350 ntBASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Vpreb3D3Z6J4 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Vpreb3D3Z6J4 Gm42699-201ENSMUST00000198104 1657 ntBASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Vpreb3D3Z6J4 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vpreb3D3Z6J4 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vpreb3D3Z6J4 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Vpreb3D3Z6J4 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Vpreb3D3Z6J4 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC14.13□□□□□ -0.15
Vpreb3D3Z6J4 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vpreb3D3Z6J4 Zfp131-205ENSMUST00000223812 663 ntBASIC14.12□□□□□ -0.15
Vpreb3D3Z6J4 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Vpreb3D3Z6J4 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Vpreb3D3Z6J4 Abhd13-202ENSMUST00000139793 5191 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Wnk2-210ENSMUST00000162403 6147 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 H3f3aos-201ENSMUST00000097448 2905 ntBASIC14.11□□□□□ -0.15
Vpreb3D3Z6J4 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Vpreb3D3Z6J4 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Vpreb3D3Z6J4 Gpr137c-205ENSMUST00000227009 771 ntAPPRIS ALT2 BASIC14.1□□□□□ -0.15
Vpreb3D3Z6J4 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC14.1□□□□□ -0.15
Vpreb3D3Z6J4 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Vpreb3D3Z6J4 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 129.1 ms