Protein–RNA interactions for Protein: A8K010

LINC00473, Putative transcriptional regulator encoded by LINC00473, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00473A8K010 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00473A8K010 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.09■□□□□ 0.81
LINC00473A8K010 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00473A8K010 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00473A8K010 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00473A8K010 LINC01971-201ENST00000617888 1048 ntBASIC20.09■□□□□ 0.81
LINC00473A8K010 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.09■□□□□ 0.81
LINC00473A8K010 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
LINC00473A8K010 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
LINC00473A8K010 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
LINC00473A8K010 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.08■□□□□ 0.81
LINC00473A8K010 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
LINC00473A8K010 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.08■□□□□ 0.81
LINC00473A8K010 DUSP8P4-201ENST00000399538 1761 ntBASIC20.08■□□□□ 0.8
LINC00473A8K010 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00473A8K010 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
LINC00473A8K010 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.07■□□□□ 0.8
LINC00473A8K010 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.07■□□□□ 0.8
LINC00473A8K010 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00473A8K010 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00473A8K010 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00473A8K010 AC135731.1-201ENST00000569415 2548 ntBASIC20.06■□□□□ 0.8
LINC00473A8K010 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.06■□□□□ 0.8
LINC00473A8K010 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
LINC00473A8K010 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
LINC00473A8K010 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
LINC00473A8K010 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.05■□□□□ 0.8
LINC00473A8K010 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
LINC00473A8K010 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.05■□□□□ 0.8
LINC00473A8K010 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.05■□□□□ 0.8
LINC00473A8K010 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.04■□□□□ 0.8
LINC00473A8K010 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC20.04■□□□□ 0.8
LINC00473A8K010 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L13-201ENST00000554103 1267 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L15-201ENST00000611059 1267 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L23-201ENST00000615195 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L24-201ENST00000617576 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L22-201ENST00000618238 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L20-201ENST00000619712 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L21-201ENST00000622058 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L10-201ENST00000622460 1267 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 DUX4L25-201ENST00000624915 1269 ntBASIC20.04■□□□□ 0.8
LINC00473A8K010 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
LINC00473A8K010 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00473A8K010 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC00473A8K010 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00473A8K010 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00473A8K010 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.03■□□□□ 0.8
LINC00473A8K010 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.03■□□□□ 0.8
LINC00473A8K010 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC20.03■□□□□ 0.8
LINC00473A8K010 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC20.03■□□□□ 0.8
LINC00473A8K010 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
LINC00473A8K010 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00473A8K010 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
LINC00473A8K010 AC020928.2-201ENST00000588717 2197 ntBASIC20.02■□□□□ 0.8
LINC00473A8K010 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
LINC00473A8K010 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
LINC00473A8K010 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC00473A8K010 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.02■□□□□ 0.79
LINC00473A8K010 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
LINC00473A8K010 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.01■□□□□ 0.79
LINC00473A8K010 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
LINC00473A8K010 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20■□□□□ 0.79
LINC00473A8K010 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC00473A8K010 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC00473A8K010 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC00473A8K010 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20■□□□□ 0.79
LINC00473A8K010 KAZN-207ENST00000503743 1475 ntTSL 1 (best) BASIC20■□□□□ 0.79
LINC00473A8K010 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
LINC00473A8K010 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC19.99■□□□□ 0.79
LINC00473A8K010 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00473A8K010 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
LINC00473A8K010 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.99■□□□□ 0.79
LINC00473A8K010 DUX4L11-201ENST00000611504 1267 ntBASIC19.99■□□□□ 0.79
LINC00473A8K010 DUX4L12-201ENST00000614593 1267 ntBASIC19.99■□□□□ 0.79
LINC00473A8K010 DUX4L14-201ENST00000621227 1267 ntBASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms