Protein–RNA interactions for Protein: A6H584

Col6a5, Collagen alpha-5(VI) chain, mousemouse

Predictions only

Length 2,640 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5A6H584 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Col6a5A6H584 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC17.73■□□□□ 0.43
Col6a5A6H584 Gm10837-201ENSMUST00000100294 1536 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
Col6a5A6H584 Arl6ip4-201ENSMUST00000031351 1192 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a5A6H584 Pth2-201ENSMUST00000042754 503 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a5A6H584 Ostc-201ENSMUST00000043937 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Col6a5A6H584 Gm9847-201ENSMUST00000052528 599 ntBASIC17.72■□□□□ 0.43
Col6a5A6H584 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a5A6H584 Kras-202ENSMUST00000111710 1194 ntTSL 5 BASIC17.72■□□□□ 0.43
Col6a5A6H584 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a5A6H584 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a5A6H584 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Col6a5A6H584 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a5A6H584 Fam117a-201ENSMUST00000037502 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a5A6H584 Appbp2os-202ENSMUST00000206972 447 ntBASIC17.71■□□□□ 0.43
Col6a5A6H584 Ypel1-202ENSMUST00000090199 631 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Col6a5A6H584 Arhgap39-204ENSMUST00000176219 542 ntTSL 5 BASIC17.7■□□□□ 0.42
Col6a5A6H584 Gsc2-201ENSMUST00000012279 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a5A6H584 Bub3-205ENSMUST00000208571 747 ntTSL 5 BASIC17.7■□□□□ 0.42
Col6a5A6H584 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a5A6H584 Ppp1ca-201ENSMUST00000046094 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Col6a5A6H584 Gm29257-201ENSMUST00000186115 639 ntBASIC17.69■□□□□ 0.42
Col6a5A6H584 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a5A6H584 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a5A6H584 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a5A6H584 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Col6a5A6H584 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a5A6H584 Alyref2-201ENSMUST00000081527 1273 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col6a5A6H584 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Col6a5A6H584 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
Col6a5A6H584 Rap1a-202ENSMUST00000197094 782 ntTSL 3 BASIC17.68■□□□□ 0.42
Col6a5A6H584 Selenof-201ENSMUST00000082437 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a5A6H584 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a5A6H584 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Col6a5A6H584 Gm28417-201ENSMUST00000185218 785 ntTSL 3 BASIC17.67■□□□□ 0.42
Col6a5A6H584 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Pdss1-207ENSMUST00000152170 1538 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Gm44428-201ENSMUST00000204474 874 ntBASIC17.66■□□□□ 0.42
Col6a5A6H584 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Marcksl1-201ENSMUST00000062356 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Ccdc84-212ENSMUST00000217351 888 ntTSL 3 BASIC17.66■□□□□ 0.42
Col6a5A6H584 Pawr-202ENSMUST00000218332 870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Kcnip2-201ENSMUST00000026247 1203 ntAPPRIS ALT1 TSL 5 BASIC17.66■□□□□ 0.42
Col6a5A6H584 Clec3b-201ENSMUST00000026890 992 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Hoxb7-201ENSMUST00000049352 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Col6a5A6H584 Gm2415-201ENSMUST00000128982 1474 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a5A6H584 Metrnl-201ENSMUST00000036742 1401 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a5A6H584 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a5A6H584 Xpa-202ENSMUST00000058232 1241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a5A6H584 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Col6a5A6H584 Acad9-205ENSMUST00000196648 552 ntTSL 3 BASIC17.65■□□□□ 0.42
Col6a5A6H584 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Col6a5A6H584 Dusp2-201ENSMUST00000028846 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Col6a5A6H584 Flvcr1-202ENSMUST00000191946 1216 ntBASIC17.64■□□□□ 0.41
Col6a5A6H584 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Col6a5A6H584 Gm12922-201ENSMUST00000120626 809 ntBASIC17.64■□□□□ 0.41
Col6a5A6H584 Gm45095-201ENSMUST00000206736 254 ntTSL 5 BASIC17.64■□□□□ 0.41
Col6a5A6H584 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a5A6H584 Srsf6-202ENSMUST00000126163 515 ntTSL 5 BASIC17.63■□□□□ 0.41
Col6a5A6H584 A030005L19Rik-201ENSMUST00000220768 806 ntAPPRIS P1 BASIC17.63■□□□□ 0.41
Col6a5A6H584 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 Cldn10-203ENSMUST00000100314 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 Rgs10-205ENSMUST00000145739 564 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 Gm20421-201ENSMUST00000153344 672 ntTSL 3 BASIC17.62■□□□□ 0.41
Col6a5A6H584 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a5A6H584 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a5A6H584 2810001G20Rik-202ENSMUST00000146333 959 ntTSL 3 BASIC17.61■□□□□ 0.41
Col6a5A6H584 Rtl10-201ENSMUST00000146673 865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a5A6H584 Efna3-203ENSMUST00000200436 742 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col6a5A6H584 Kcnk1-202ENSMUST00000212831 1309 ntTSL 5 BASIC17.61■□□□□ 0.41
Col6a5A6H584 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a5A6H584 Spr-203ENSMUST00000174769 1029 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a5A6H584 Gm5131-201ENSMUST00000212776 1238 ntBASIC17.61■□□□□ 0.41
Col6a5A6H584 Tmem191c-213ENSMUST00000164950 1394 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
Col6a5A6H584 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Col6a5A6H584 AC140930.3-201ENSMUST00000222935 274 ntBASIC17.6■□□□□ 0.41
Col6a5A6H584 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a5A6H584 Gm7417-201ENSMUST00000192950 473 ntBASIC17.59■□□□□ 0.41
Col6a5A6H584 Fam216a-201ENSMUST00000031419 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a5A6H584 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a5A6H584 Mpnd-209ENSMUST00000162883 1400 ntTSL 5 BASIC17.58■□□□□ 0.41
Col6a5A6H584 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a5A6H584 Gm27454-201ENSMUST00000185090 204 ntBASIC17.58■□□□□ 0.41
Col6a5A6H584 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC17.58■□□□□ 0.4
Col6a5A6H584 AC164629.5-201ENSMUST00000220387 632 ntBASIC17.58■□□□□ 0.4
Col6a5A6H584 Stk19-201ENSMUST00000077477 1120 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Tmem120a-201ENSMUST00000043378 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Wipi1-203ENSMUST00000106689 1220 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Plekhj1-201ENSMUST00000036805 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Tmem55b-209ENSMUST00000162957 1465 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a5A6H584 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC17.56■□□□□ 0.4
Col6a5A6H584 Gadd45a-207ENSMUST00000204369 716 ntTSL 5 BASIC17.56■□□□□ 0.4
Col6a5A6H584 Hmg20b-202ENSMUST00000105323 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Col6a5A6H584 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a5A6H584 Hoxd3os1-204ENSMUST00000156342 796 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Col6a5A6H584 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Col6a5A6H584 Mapkapk3-208ENSMUST00000192054 944 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 135.1 ms