Protein–RNA interactions for Protein: A0A0G2JEM0

Trav3n-3, T cell receptor alpha variable 3D-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3n-3A0A0G2JEM0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Cacnb3-202ENSMUST00000109150 2670 ntTSL 5 BASIC16.93■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Osbpl2-201ENSMUST00000040668 2805 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 AC157572.2-201ENSMUST00000226970 908 ntBASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Rxrb-201ENSMUST00000044858 2623 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC16.9■□□□□ 0.3
Trav3n-3A0A0G2JEM0 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Zfp131-205ENSMUST00000223812 663 ntBASIC16.89■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Zdhhc5-201ENSMUST00000035840 4706 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Eml2-202ENSMUST00000117338 2765 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Trim33-202ENSMUST00000106860 5025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Ewsr1-205ENSMUST00000102930 2174 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC16.87■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Nab2-202ENSMUST00000099157 2311 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Hoxd1-201ENSMUST00000047793 1862 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Dtnb-210ENSMUST00000173199 2820 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 A230087F16Rik-201ENSMUST00000181055 2098 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Picalm-212ENSMUST00000208730 3427 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Cnnm1-202ENSMUST00000223787 2931 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 1700016A09Rik-201ENSMUST00000192004 835 ntBASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Znhit6-201ENSMUST00000098534 2339 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Mapkapk2-201ENSMUST00000016672 2854 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Foxg1-201ENSMUST00000021333 2941 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Lbx1-201ENSMUST00000099401 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Dgat2-201ENSMUST00000033001 2262 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Trav3n-3A0A0G2JEM0 Ttc7b-201ENSMUST00000062957 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Trav3n-3A0A0G2JEM0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Pth1r-201ENSMUST00000006005 2307 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Jak2-201ENSMUST00000025705 4947 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm24970-201ENSMUST00000175582 82 ntBASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Fbxl3-204ENSMUST00000132004 2534 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC16.81■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trav3n-3A0A0G2JEM0 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms