Protein–RNA interactions for Protein: A0A0B4J2D9

IGKV1D-13, Immunoglobulin kappa variable 1D-13, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGKV1D-13A0A0B4J2D9 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
IGKV1D-13A0A0B4J2D9 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV1D-13A0A0B4J2D9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV1D-13A0A0B4J2D9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
IGKV1D-13A0A0B4J2D9 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC20.39■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 DRAM2-211ENST00000539140 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 WHAMMP3-201ENST00000611636 1609 ntBASIC20.38■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 EVA1C-201ENST00000300255 1998 ntAPPRIS P3 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC20.38■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 AC044849.2-201ENST00000606596 710 ntBASIC20.36■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.36■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 R3HCC1-201ENST00000265806 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 GTF2E2-201ENST00000355904 1762 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC20.33■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 ABHD12-202ENST00000376542 1725 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.33■□□□□ 0.85
IGKV1D-13A0A0B4J2D9 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.33■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC20.33■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.33■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TSPAN10-203ENST00000574882 1837 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 AC021231.2-201ENST00000594613 730 ntBASIC20.32■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TSGA13-204ENST00000456951 2046 ntAPPRIS P2 TSL 2 BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 U2AF1-204ENST00000459639 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 U2AF1L5-204ENST00000623375 1675 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 SPOCK3-221ENST00000512648 1456 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 C2CD4D-201ENST00000454109 1757 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TSPAN13-201ENST00000262067 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 CASP9-202ENST00000348549 1621 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
IGKV1D-13A0A0B4J2D9 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.27■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.26■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 CEBPA-AS1-201ENST00000592982 2198 ntBASIC20.25■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC20.25■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 PDK1-202ENST00000392571 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 ERN1-208ENST00000606895 2068 ntBASIC20.24■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 DUX4L29-201ENST00000425409 679 ntBASIC20.24■□□□□ 0.83
IGKV1D-13A0A0B4J2D9 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 162.6 ms