Protein–RNA interactions for Protein: A0A0B4J277

TRAV22, T-cell receptor alpha variable 22 (Fragment), humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV22A0A0B4J277 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 AP004833.2-201ENST00000532228 1454 ntBASIC14.02□□□□□ -0.16
TRAV22A0A0B4J277 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV22A0A0B4J277 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
TRAV22A0A0B4J277 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC14.02□□□□□ -0.17
TRAV22A0A0B4J277 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
TRAV22A0A0B4J277 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
TRAV22A0A0B4J277 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 COPS6-201ENST00000303904 1432 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
TRAV22A0A0B4J277 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 TMEM202-AS1-202ENST00000565181 2325 ntBASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 ZBTB22-208ENST00000431845 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
TRAV22A0A0B4J277 DUSP8P4-201ENST00000399538 1761 ntBASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 FAM89B-203ENST00000530349 1263 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 RAB11FIP1-203ENST00000522727 1866 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
TRAV22A0A0B4J277 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 P2RX5-201ENST00000225328 2309 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC13.96□□□□□ -0.17
TRAV22A0A0B4J277 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
TRAV22A0A0B4J277 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV22A0A0B4J277 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV22A0A0B4J277 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV22A0A0B4J277 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
TRAV22A0A0B4J277 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
TRAV22A0A0B4J277 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 AC010864.1-201ENST00000609407 1511 ntBASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
TRAV22A0A0B4J277 CPOX-201ENST00000264193 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
TRAV22A0A0B4J277 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 AC092803.2-201ENST00000564287 1899 ntBASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 ERN1-208ENST00000606895 2068 ntBASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
TRAV22A0A0B4J277 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms