Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
TRAV13-1A0A0B4J241 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC17.05■□□□□ 0.32
TRAV13-1A0A0B4J241 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-1A0A0B4J241 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
TRAV13-1A0A0B4J241 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 AP004609.3-201ENST00000610705 1884 ntBASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 AC020928.2-201ENST00000588717 2197 ntBASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TRAV13-1A0A0B4J241 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV13-1A0A0B4J241 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV13-1A0A0B4J241 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TRAV13-1A0A0B4J241 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC17.02■□□□□ 0.32
TRAV13-1A0A0B4J241 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TRAV13-1A0A0B4J241 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TRAV13-1A0A0B4J241 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV13-1A0A0B4J241 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRAV13-1A0A0B4J241 AC092803.2-201ENST00000564287 1899 ntBASIC17■□□□□ 0.31
TRAV13-1A0A0B4J241 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
TRAV13-1A0A0B4J241 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
TRAV13-1A0A0B4J241 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 ADD1-202ENST00000355842 4743 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRAV13-1A0A0B4J241 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC16.98■□□□□ 0.31
TRAV13-1A0A0B4J241 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
TRAV13-1A0A0B4J241 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC16.96■□□□□ 0.31
TRAV13-1A0A0B4J241 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC16.96■□□□□ 0.31
TRAV13-1A0A0B4J241 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV13-1A0A0B4J241 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC16.96■□□□□ 0.31
TRAV13-1A0A0B4J241 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
TRAV13-1A0A0B4J241 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
TRAV13-1A0A0B4J241 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 DUX4L28-201ENST00000623687 678 ntBASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 CCSAP-201ENST00000284617 5121 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC16.95■□□□□ 0.3
TRAV13-1A0A0B4J241 DUSP8P4-201ENST00000399538 1761 ntBASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 CIB2-204ENST00000557846 934 ntTSL 3 BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 CALM3-209ENST00000597743 577 ntTSL 4 BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 PKM-204ENST00000449901 2526 ntTSL 2 BASIC16.94■□□□□ 0.3
TRAV13-1A0A0B4J241 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 PRR5-202ENST00000336985 1878 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 TTC3-225ENST00000540756 2025 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC16.93■□□□□ 0.3
TRAV13-1A0A0B4J241 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
TRAV13-1A0A0B4J241 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 89.9 ms