Protein–RNA interactions for Protein: A0A0A6YYJ7

TRAV8-3, T-cell receptor alpha variable 8-3 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-3A0A0A6YYJ7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 ZNRF2P2-203ENST00000454624 420 ntBASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC17.31■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 LINC01971-201ENST00000617888 1048 ntBASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 AC020928.2-201ENST00000588717 2197 ntBASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 AC135983.2-203ENST00000454486 1613 ntBASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC17.28■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.27■□□□□ 0.36
TRAV8-3A0A0A6YYJ7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 AC100797.4-201ENST00000631653 1827 ntBASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 KCNQ5-205ENST00000370398 6345 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 AGPS-202ENST00000409888 815 ntTSL 4 BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 WHAMMP2-203ENST00000563942 1603 ntBASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 CYS1-201ENST00000381813 2738 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC17.21■□□□□ 0.35
TRAV8-3A0A0A6YYJ7 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 AC145676.1-201ENST00000514988 2004 ntBASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L11-201ENST00000611504 1267 ntBASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 MIR7108-201ENST00000614319 87 ntBASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L12-201ENST00000614593 1267 ntBASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 DUX4L14-201ENST00000621227 1267 ntBASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC17.19■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-3A0A0A6YYJ7 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms