Protein–RNA interactions for Protein: A0A0A6YXN5

Ighv1-43, Immunoglobulin heavy variable V1-43 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv1-43A0A0A6YXN5 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC20.98■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Ighv1-43A0A0A6YXN5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC20.95■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Ipmk-203ENSMUST00000121446 1492 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC20.93■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 AC117769.4-201ENSMUST00000225679 685 ntBASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
Ighv1-43A0A0A6YXN5 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC20.88■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Siah1a-201ENSMUST00000045296 1968 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.87■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-43A0A0A6YXN5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.85■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC20.84■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Ighv1-43A0A0A6YXN5 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Dapk2-201ENSMUST00000034944 1772 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Fgf16-201ENSMUST00000033581 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Ighv1-43A0A0A6YXN5 AC164433.2-201ENSMUST00000226346 1701 ntBASIC20.81■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Sox17-202ENSMUST00000116652 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Gm5921-201ENSMUST00000075898 882 ntBASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Cldnd1-204ENSMUST00000162057 1540 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ighv1-43A0A0A6YXN5 6430628N08Rik-202ENSMUST00000165938 1602 ntTSL 5 BASIC20.79■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Fam50b-202ENSMUST00000221037 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Susd3-203ENSMUST00000119721 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Tbc1d10a-206ENSMUST00000180088 1921 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Tmem150a-202ENSMUST00000132243 1478 ntTSL 5 BASIC20.77■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.77■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
Ighv1-43A0A0A6YXN5 Mpnd-208ENSMUST00000159996 1444 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms