Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav9n-4A0A075B631 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Taf4-204ENSMUST00000227325 4380 ntAPPRIS ALT2 BASIC15.31■□□□□ 0.04
Trav9n-4A0A075B631 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9n-4A0A075B631 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
Trav9n-4A0A075B631 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav9n-4A0A075B631 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 AC150314.2-201ENSMUST00000214135 834 ntTSL 5 BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav9n-4A0A075B631 Srcap-210ENSMUST00000188124 2048 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9n-4A0A075B631 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9n-4A0A075B631 Atp2b2-208ENSMUST00000205052 5658 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav9n-4A0A075B631 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9n-4A0A075B631 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
Trav9n-4A0A075B631 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Dlg3-201ENSMUST00000000901 4885 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
Trav9n-4A0A075B631 Rpl19-ps4-201ENSMUST00000167150 625 ntBASIC15.25■□□□□ 0.03
Trav9n-4A0A075B631 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-4A0A075B631 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-4A0A075B631 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav9n-4A0A075B631 Abhd17c-201ENSMUST00000117085 2238 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Gm15156-201ENSMUST00000148217 417 ntTSL 3 BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.24■□□□□ 0.03
Trav9n-4A0A075B631 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 H3f3aos-201ENSMUST00000097448 2905 ntBASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 Mtor-201ENSMUST00000057580 1003 ntTSL 1 (best) BASIC15.23■□□□□ 0.03
Trav9n-4A0A075B631 Map3k15-201ENSMUST00000033665 4348 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Papd7-202ENSMUST00000198607 4750 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Trav9n-4A0A075B631 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Trav9n-4A0A075B631 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Dbp-201ENSMUST00000080885 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Trav9n-4A0A075B631 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Jak2-202ENSMUST00000065796 5030 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Ppa2-201ENSMUST00000029644 1226 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Trav9n-4A0A075B631 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Clip1-205ENSMUST00000111566 6133 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Trav9n-4A0A075B631 Fam89a-201ENSMUST00000055257 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 E330009J07Rik-201ENSMUST00000039008 1949 ntTSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
Trav9n-4A0A075B631 Flt3l-211ENSMUST00000211429 1358 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 13.5 ms