Protein–RNA interactions for Protein: A0A075B625

Trav4d-3, T cell receptor alpha variable 4D-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4d-3A0A075B625 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 Rnf130-201ENSMUST00000054684 1415 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 Fam3c-201ENSMUST00000081288 1487 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Trav4d-3A0A075B625 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4d-3A0A075B625 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
Trav4d-3A0A075B625 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4d-3A0A075B625 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Trav4d-3A0A075B625 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Notumos-201ENSMUST00000151998 2659 ntBASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 P4htm-201ENSMUST00000006853 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Cbln2-203ENSMUST00000122464 1907 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Trav4d-3A0A075B625 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Henmt1-201ENSMUST00000059946 1998 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Pkd2-201ENSMUST00000086831 5219 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Trav4d-3A0A075B625 Atxn7l2-201ENSMUST00000102633 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Ezh2-203ENSMUST00000114616 2670 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Nup153-201ENSMUST00000021803 6109 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Syndig1l-204ENSMUST00000222422 1758 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Fam193b-201ENSMUST00000021957 4341 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Trav4d-3A0A075B625 Six5-201ENSMUST00000049454 3007 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Trav4d-3A0A075B625 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC15.33■□□□□ 0.05
Trav4d-3A0A075B625 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Krt10-201ENSMUST00000103131 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Rab43-203ENSMUST00000078647 4605 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Cebpa-202ENSMUST00000205391 2161 ntTSL 5 BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Rfxap-201ENSMUST00000044373 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Gm26766-202ENSMUST00000227544 2347 ntBASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Trav4d-3A0A075B625 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Zfp513-201ENSMUST00000031562 2213 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Tirap-207ENSMUST00000177129 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Sirt1-203ENSMUST00000120239 4430 ntAPPRIS P3 TSL 5 BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Chst14-201ENSMUST00000099546 2090 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
Trav4d-3A0A075B625 Lrrc24-201ENSMUST00000036247 1758 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4d-3A0A075B625 Col23a1-201ENSMUST00000102765 5658 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
Trav4d-3A0A075B625 Gm38160-201ENSMUST00000193090 2499 ntBASIC15.31■□□□□ 0.04
Trav4d-3A0A075B625 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
Trav4d-3A0A075B625 Map3k21-201ENSMUST00000034316 5693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4d-3A0A075B625 Paqr3-203ENSMUST00000112969 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4d-3A0A075B625 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4d-3A0A075B625 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Trav4d-3A0A075B625 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Senp6-201ENSMUST00000037484 5111 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Slc15a4-201ENSMUST00000031367 2732 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Trav4d-3A0A075B625 Bend6-201ENSMUST00000062289 2487 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Cnot6-201ENSMUST00000020624 2498 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Pim3-201ENSMUST00000042818 2419 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Trav4d-3A0A075B625 Capza2-201ENSMUST00000015877 2537 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4d-3A0A075B625 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Trav4d-3A0A075B625 Rapgefl1-202ENSMUST00000107479 4855 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 St7-209ENSMUST00000115420 2094 ntTSL 5 BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 BC037034-201ENSMUST00000048421 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Rfx5-205ENSMUST00000107260 2355 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Zfp3-201ENSMUST00000060444 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Triobp-201ENSMUST00000109687 2570 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
Trav4d-3A0A075B625 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Slc25a1-201ENSMUST00000003622 1678 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Acot3-202ENSMUST00000120927 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 Ppm1g-205ENSMUST00000202294 1868 ntTSL 5 BASIC15.25■□□□□ 0.03
Trav4d-3A0A075B625 AC164550.2-201ENSMUST00000219127 2086 ntTSL 5 BASIC15.24■□□□□ 0.03
Trav4d-3A0A075B625 Amigo1-203ENSMUST00000106659 1360 ntTSL 1 (best) BASIC15.24■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 59.7 ms