Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 TAF1C-213ENST00000565279 912 ntTSL 515.85■□□□□ 0.137e-10■□□□□ 10.1
SRSF1Q07955 TAF1C-205ENST00000561955 570 ntAPPRIS ALT2 TSL 415.31■□□□□ 0.047e-10■□□□□ 10.1
SRSF1Q07955 APEX1-204ENST00000553368 304 ntTSL 314.93□□□□□ -0.026e-8■□□□□ 10.1
SRSF1Q07955 TAF1C-220ENST00000569505 564 ntTSL 314.29□□□□□ -0.127e-10■□□□□ 10.1
SRSF1Q07955 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.296e-8■□□□□ 10.1
SRSF1Q07955 APEX1-213ENST00000556296 571 ntTSL 412.4□□□□□ -0.426e-8■□□□□ 10.1
SRSF1Q07955 APEX1-208ENST00000554813 654 ntTSL 312.25□□□□□ -0.456e-8■□□□□ 10.1
SRSF1Q07955 APEX1-211ENST00000555839 952 ntTSL 212.25□□□□□ -0.456e-8■□□□□ 10.1
SRSF1Q07955 APEX1-201ENST00000216714 1484 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.56e-8■□□□□ 10.1
SRSF1Q07955 APEX1-205ENST00000553555 1603 ntTSL 1 (best)11.65□□□□□ -0.546e-8■□□□□ 10.1
SRSF1Q07955 APEX1-207ENST00000554325 568 ntTSL 511.38□□□□□ -0.596e-8■□□□□ 10.1
SRSF1Q07955 APEX1-217ENST00000557181 566 ntTSL 311.38□□□□□ -0.596e-8■□□□□ 10.1
SRSF1Q07955 APEX1-206ENST00000553681 899 ntTSL 311.28□□□□□ -0.66e-8■□□□□ 10.1
SRSF1Q07955 DHX30-204ENST00000441384 1957 ntTSL 210.92□□□□□ -0.666e-8■□□□□ 10.1
SRSF1Q07955 APEX1-218ENST00000557344 671 ntTSL 210.49□□□□□ -0.736e-8■□□□□ 10.1
SRSF1Q07955 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC10.47□□□□□ -0.736e-8■□□□□ 10.1
SRSF1Q07955 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC10.46□□□□□ -0.736e-8■□□□□ 10.1
SRSF1Q07955 APEX1-209ENST00000555306 898 ntTSL 510.37□□□□□ -0.756e-8■□□□□ 10.1
SRSF1Q07955 APEX1-212ENST00000556054 773 ntTSL 310.37□□□□□ -0.756e-8■□□□□ 10.1
SRSF1Q07955 APEX1-219ENST00000557365 831 ntTSL 310.37□□□□□ -0.756e-8■□□□□ 10.1
SRSF1Q07955 APEX1-220ENST00000557592 640 ntTSL 510.15□□□□□ -0.786e-8■□□□□ 10.1
SRSF1Q07955 APEX1-215ENST00000557150 740 ntTSL 310.01□□□□□ -0.816e-8■□□□□ 10.1
SRSF1Q07955 APEX1-216ENST00000557159 1803 ntTSL 29.96□□□□□ -0.816e-8■□□□□ 10.1
SRSF1Q07955 APEX1-210ENST00000555414 1437 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.826e-8■□□□□ 10.1
SRSF1Q07955 APEX1-202ENST00000398030 1387 ntAPPRIS P1 TSL 1 (best) BASIC9.86□□□□□ -0.836e-8■□□□□ 10.1
SRSF1Q07955 DHX30-206ENST00000446256 3660 ntAPPRIS P2 TSL 2 BASIC9.85□□□□□ -0.836e-8■□□□□ 10.1
SRSF1Q07955 DHX30-207ENST00000457607 3748 ntTSL 5 BASIC9.84□□□□□ -0.836e-8■□□□□ 10.1
SRSF1Q07955 DHX30-202ENST00000395745 3887 ntTSL 1 (best)8.92□□□□□ -0.986e-8■□□□□ 10.1
SRSF1Q07955 APEX1-214ENST00000557054 888 ntTSL 5 BASIC7.94□□□□□ -1.146e-8■□□□□ 10.1
SRSF1Q07955 DNAJC6-207ENST00000494710 1621 ntTSL 522.68■■□□□ 1.227e-7■□□□□ 10.1
SRSF1Q07955 DNAJC6-204ENST00000463018 546 ntTSL 35.34□□□□□ -1.557e-7■□□□□ 10.1
SRSF1Q07955 CHRD-203ENST00000356534 1252 ntTSL 1 (best)18.83■□□□□ 0.65e-7■□□□□ 10.1
SRSF1Q07955 CHRD-208ENST00000460627 4719 ntTSL 214.08□□□□□ -0.165e-7■□□□□ 10.1
SRSF1Q07955 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.275e-7■□□□□ 10.1
SRSF1Q07955 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.455e-7■□□□□ 10.1
SRSF1Q07955 CHRD-205ENST00000448472 3547 ntTSL 1 (best)12.24□□□□□ -0.455e-7■□□□□ 10.1
SRSF1Q07955 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC11.53□□□□□ -0.565e-7■□□□□ 10.1
SRSF1Q07955 CHRD-204ENST00000420973 3492 ntTSL 1 (best)11.47□□□□□ -0.575e-7■□□□□ 10.1
SRSF1Q07955 CHRD-212ENST00000470150 4234 ntTSL 211.13□□□□□ -0.635e-7■□□□□ 10.1
SRSF1Q07955 ENOSF1-208ENST00000580605 699 ntTSL 313.03□□□□□ -0.321e-6■□□□□ 10.1
SRSF1Q07955 ACADVL-225ENST00000581378 752 ntTSL 313.78□□□□□ -0.22e-14■□□□□ 10.1
SRSF1Q07955 ACADVL-230ENST00000582379 833 ntTSL 38.95□□□□□ -0.982e-14■□□□□ 10.1
SRSF1Q07955 C2orf42-212ENST00000470096 579 ntTSL 415.68■□□□□ 0.14e-17■□□□□ 10.1
SRSF1Q07955 TIA1-219ENST00000496452 853 ntTSL 215.68■□□□□ 0.14e-17■□□□□ 10.1
SRSF1Q07955 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC15.12■□□□□ 0.014e-17■□□□□ 10.1
SRSF1Q07955 TIA1-213ENST00000481650 549 ntTSL 413.62□□□□□ -0.234e-17■□□□□ 10.1
SRSF1Q07955 TIA1-210ENST00000474809 915 ntTSL 512.79□□□□□ -0.364e-17■□□□□ 10.1
SRSF1Q07955 TIA1-203ENST00000415783 4633 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.954e-17■□□□□ 10.1
SRSF1Q07955 TIA1-205ENST00000433529 4647 ntTSL 2 BASIC8.77□□□□□ -1.014e-17■□□□□ 10.1
SRSF1Q07955 TIA1-204ENST00000416149 821 ntTSL 1 (best) BASIC8.16□□□□□ -1.14e-17■□□□□ 10.1
SRSF1Q07955 TIA1-211ENST00000477044 904 ntTSL 56.55□□□□□ -1.364e-17■□□□□ 10.1
SRSF1Q07955 TIA1-201ENST00000282574 3823 ntTSL 5 BASIC5.95□□□□□ -1.464e-17■□□□□ 10.1
SRSF1Q07955 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.74e-10■□□□□ 10.1
SRSF1Q07955 SAFB-213ENST00000592555 1360 ntTSL 516.13■□□□□ 0.171e-7■□□□□ 10.1
SRSF1Q07955 MED10-202ENST00000503112 925 ntTSL 213.86□□□□□ -0.194e-10■□□□□ 10.1
SRSF1Q07955 SLC6A8-207ENST00000466243 544 ntTSL 212.81□□□□□ -0.361e-9■□□□□ 10.1
SRSF1Q07955 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.411e-7■□□□□ 10.1
SRSF1Q07955 FDPS-215ENST00000490140 680 ntTSL 211.68□□□□□ -0.541e-7■□□□□ 10.1
SRSF1Q07955 FDPS-217ENST00000492244 673 ntTSL 311.68□□□□□ -0.541e-7■□□□□ 10.1
SRSF1Q07955 SAFB-210ENST00000591991 3471 ntTSL 28.99□□□□□ -0.971e-7■□□□□ 10.1
SRSF1Q07955 USP48-212ENST00000527823 554 ntTSL 48.48□□□□□ -1.051e-7■□□□□ 10.1
SRSF1Q07955 LRIF1-201ENST00000369763 3475 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.081e-7■□□□□ 10.1
SRSF1Q07955 FDPS-218ENST00000492887 554 ntTSL 26.75□□□□□ -1.331e-7■□□□□ 10.1
SRSF1Q07955 SLC39A7-204ENST00000463972 1410 ntTSL 210.99□□□□□ -0.655e-6■□□□□ 10.1
SRSF1Q07955 LUC7L3-216ENST00000509487 647 ntTSL 33.63□□□□□ -1.831e-7■□□□□ 10.1
SRSF1Q07955 NSFL1C-205ENST00000470376 845 ntTSL 320.33■□□□□ 0.853e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-203ENST00000381653 1446 ntTSL 519.76■□□□□ 0.753e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-212ENST00000555568 863 ntTSL 317.68■□□□□ 0.423e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-213ENST00000555944 2588 ntTSL 213.62□□□□□ -0.233e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC13.33□□□□□ -0.283e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.04□□□□□ -0.323e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.373e-6■□□□□ 10.1
SRSF1Q07955 NSFL1C-204ENST00000461211 3799 ntTSL 55.81□□□□□ -1.483e-6■□□□□ 10.1
SRSF1Q07955 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC14.27□□□□□ -0.123e-12■□□□□ 10.1
SRSF1Q07955 SRSF1-203ENST00000581497 438 ntTSL 37.48□□□□□ -1.212e-31■□□□□ 10.1
SRSF1Q07955 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3.21□□□□□ -1.92e-31■□□□□ 10.1
SRSF1Q07955 PRODH2-204ENST00000588266 567 ntTSL 314.32□□□□□ -0.121e-6■□□□□ 10.1
SRSF1Q07955 DCAF8-205ENST00000419626 439 ntTSL 212.55□□□□□ -0.42e-8■□□□□ 10.1
SRSF1Q07955 ACIN1-217ENST00000555566 734 ntTSL 310.68□□□□□ -0.72e-8■□□□□ 10.1
SRSF1Q07955 PKD1-203ENST00000423118 14135 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.036e-7■□□□□ 10.1
SRSF1Q07955 PKD1-201ENST00000262304 14138 ntAPPRIS P3 TSL 1 (best) BASIC8.55□□□□□ -1.046e-7■□□□□ 10.1
SRSF1Q07955 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.281e-6■□□□□ 10.1
SRSF1Q07955 PSME2-212ENST00000560370 620 ntTSL 314.04□□□□□ -0.163e-6■□□□□ 10.1
SRSF1Q07955 PSME2-217ENST00000615264 874 ntTSL 5 BASIC13.08□□□□□ -0.323e-6■□□□□ 10.1
SRSF1Q07955 PSME2-202ENST00000471700 706 ntTSL 312.78□□□□□ -0.363e-6■□□□□ 10.1
SRSF1Q07955 PSME2-213ENST00000560410 755 ntTSL 3 BASIC11.38□□□□□ -0.593e-6■□□□□ 10.1
SRSF1Q07955 TJAP1-209ENST00000442878 909 ntTSL 514.39□□□□□ -0.112e-6■□□□□ 10
SRSF1Q07955 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC11.67□□□□□ -0.542e-6■□□□□ 10
SRSF1Q07955 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC10.69□□□□□ -0.72e-6■□□□□ 10
SRSF1Q07955 TJAP1-205ENST00000372452 2665 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.72e-6■□□□□ 10
SRSF1Q07955 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC10.57□□□□□ -0.722e-6■□□□□ 10
SRSF1Q07955 TJAP1-201ENST00000259751 2720 ntAPPRIS P1 TSL 2 BASIC10.13□□□□□ -0.792e-6■□□□□ 10
SRSF1Q07955 TJAP1-202ENST00000372444 2778 ntAPPRIS P1 TSL 5 BASIC9.97□□□□□ -0.812e-6■□□□□ 10
SRSF1Q07955 TJAP1-203ENST00000372445 2751 ntTSL 1 (best) BASIC9.97□□□□□ -0.812e-6■□□□□ 10
SRSF1Q07955 TJAP1-213ENST00000483640 3468 ntTSL 57.69□□□□□ -1.182e-6■□□□□ 10
SRSF1Q07955 TJAP1-215ENST00000612912 4312 ntTSL 2 BASIC7.67□□□□□ -1.182e-6■□□□□ 10
SRSF1Q07955 TSC22D4-205ENST00000493217 2060 ntTSL 1 (best)14.22□□□□□ -0.133e-9■□□□□ 10
SRSF1Q07955 MSMO1-205ENST00000507013 973 ntTSL 220.15■□□□□ 0.822e-7■□□□□ 10
SRSF1Q07955 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC13.71□□□□□ -0.212e-7■□□□□ 10
SRSF1Q07955 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.492e-7■□□□□ 10
Retrieved 100 of 14,836 protein–RNA pairs in 446.8 ms