Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.996e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-212ENST00000525695 907 ntTSL 520.94■□□□□ 0.946e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.636e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-216ENST00000526710 996 ntTSL 218.94■□□□□ 0.626e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-235ENST00000530848 688 ntTSL 318.37■□□□□ 0.536e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.56e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC17.92■□□□□ 0.466e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC17.74■□□□□ 0.436e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-228ENST00000529832 600 ntTSL 417.64■□□□□ 0.416e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-208ENST00000524883 828 ntTSL 217.51■□□□□ 0.396e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-209ENST00000524900 343 ntTSL 516.66■□□□□ 0.266e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-244ENST00000532543 791 ntTSL 316.34■□□□□ 0.216e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-237ENST00000531281 813 ntTSL 216.3■□□□□ 0.26e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-249ENST00000533749 633 ntTSL 516.28■□□□□ 0.26e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-206ENST00000524397 957 ntTSL 316.17■□□□□ 0.186e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-224ENST00000529007 861 ntTSL 216.17■□□□□ 0.186e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.17■□□□□ 0.186e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.186e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.08■□□□□ 0.176e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC15.71■□□□□ 0.116e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-250ENST00000533833 831 ntTSL 515.64■□□□□ 0.096e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-231ENST00000530306 583 ntTSL 215.6■□□□□ 0.096e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-239ENST00000531670 926 ntTSL 315.6■□□□□ 0.096e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.086e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-222ENST00000528519 553 ntTSL 315.55■□□□□ 0.086e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-230ENST00000530191 853 ntTSL 314.35□□□□□ -0.116e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.136e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-252ENST00000534377 617 ntTSL 213.97□□□□□ -0.176e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-211ENST00000525261 559 ntTSL 213.89□□□□□ -0.196e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-245ENST00000532596 761 ntTSL 413.89□□□□□ -0.196e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-251ENST00000534232 817 ntTSL 513.81□□□□□ -0.26e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.236e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-233ENST00000530545 616 ntTSL 413.58□□□□□ -0.246e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-215ENST00000526340 770 ntTSL 313.13□□□□□ -0.316e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-247ENST00000533204 842 ntTSL 212.97□□□□□ -0.336e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-236ENST00000531218 787 ntTSL 312.83□□□□□ -0.366e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-253ENST00000534380 1001 ntTSL 512.83□□□□□ -0.366e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-220ENST00000528303 558 ntTSL 412.79□□□□□ -0.366e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-248ENST00000533494 758 ntTSL 512.54□□□□□ -0.46e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-214ENST00000526135 535 ntTSL 212.14□□□□□ -0.476e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-242ENST00000531953 506 ntTSL 411.9□□□□□ -0.56e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-254ENST00000534475 538 ntTSL 411.88□□□□□ -0.516e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-213ENST00000526133 367 ntTSL 29.72□□□□□ -0.856e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-226ENST00000529516 473 ntTSL 39.61□□□□□ -0.876e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-255ENST00000534804 555 ntTSL 47.87□□□□□ -1.156e-17■□□□□ 10.2
SRSF1Q07955 TRA2A-203ENST00000448549 582 ntTSL 415.28■□□□□ 0.042e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.012e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.122e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-208ENST00000490942 862 ntTSL 1 (best)14.14□□□□□ -0.152e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC13.86□□□□□ -0.192e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.282e-9■□□□□ 10.2
SRSF1Q07955 TRA2A-209ENST00000494255 1653 ntTSL 1 (best)11.25□□□□□ -0.612e-9■□□□□ 10.2
SRSF1Q07955 FASTK-213ENST00000482806 1826 ntTSL 519.09■□□□□ 0.658e-8■□□□□ 10.2
SRSF1Q07955 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.96■□□□□ 0.638e-8■□□□□ 10.2
SRSF1Q07955 FASTK-215ENST00000489884 1751 ntTSL 1 (best)18.76■□□□□ 0.598e-8■□□□□ 10.2
SRSF1Q07955 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC18.27■□□□□ 0.528e-8■□□□□ 10.2
SRSF1Q07955 FASTK-214ENST00000483953 1178 ntTSL 517.97■□□□□ 0.478e-8■□□□□ 10.2
SRSF1Q07955 FASTK-201ENST00000297532 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.278e-8■□□□□ 10.2
SRSF1Q07955 FASTK-209ENST00000469237 1904 ntTSL 515.85■□□□□ 0.138e-8■□□□□ 10.2
SRSF1Q07955 FASTK-207ENST00000466855 1894 ntTSL 515.72■□□□□ 0.118e-8■□□□□ 10.2
SRSF1Q07955 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC15.61■□□□□ 0.098e-8■□□□□ 10.2
SRSF1Q07955 FASTK-204ENST00000460980 1521 ntTSL 514.1□□□□□ -0.158e-8■□□□□ 10.2
SRSF1Q07955 FASTK-208ENST00000467237 3011 ntTSL 1 (best)11.25□□□□□ -0.618e-8■□□□□ 10.2
SRSF1Q07955 ZNF316-203ENST00000614588 939 ntTSL 319.81■□□□□ 0.767e-6■□□□□ 10.2
SRSF1Q07955 PLA2G12A-204ENST00000507961 755 ntTSL 218.37■□□□□ 0.537e-6■□□□□ 10.2
SRSF1Q07955 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.98■□□□□ 0.157e-6■□□□□ 10.2
SRSF1Q07955 ATG4B-217ENST00000475693 2237 ntTSL 215.43■□□□□ 0.067e-6■□□□□ 10.2
SRSF1Q07955 TTC38-203ENST00000421359 821 ntTSL 415.05■□□□□ -07e-6■□□□□ 10.2
SRSF1Q07955 GCFC2-208ENST00000472230 2265 ntTSL 214.67□□□□□ -0.067e-11■□□□□ 10.2
SRSF1Q07955 TTC38-202ENST00000417709 630 ntTSL 314.45□□□□□ -0.17e-6■□□□□ 10.2
SRSF1Q07955 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.167e-6■□□□□ 10.2
SRSF1Q07955 ATG4B-224ENST00000494132 828 ntTSL 213.76□□□□□ -0.217e-6■□□□□ 10.2
SRSF1Q07955 TTC38-206ENST00000475467 479 ntTSL 312.32□□□□□ -0.447e-6■□□□□ 10.2
SRSF1Q07955 TTC38-207ENST00000629918 162 ntTSL 5 BASIC11.51□□□□□ -0.577e-6■□□□□ 10.2
SRSF1Q07955 XYLB-201ENST00000207870 3664 ntAPPRIS P1 TSL 1 (best) BASIC7.99□□□□□ -1.137e-6■□□□□ 10.2
SRSF1Q07955 XYLB-202ENST00000424034 3484 ntTSL 27.13□□□□□ -1.277e-6■□□□□ 10.2
SRSF1Q07955 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -04e-10■□□□□ 10.2
SRSF1Q07955 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.11□□□□□ -0.314e-10■□□□□ 10.2
SRSF1Q07955 HNRNPA3-203ENST00000432457 643 ntTSL 38.47□□□□□ -1.054e-10■□□□□ 10.2
SRSF1Q07955 HNRNPA3-202ENST00000411529 5688 ntAPPRIS ALT2 TSL 2 BASIC8.4□□□□□ -1.064e-10■□□□□ 10.2
SRSF1Q07955 TXNIP-204ENST00000582401 2926 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.444e-18■□□□□ 10.2
SRSF1Q07955 SLC25A37-205ENST00000519192 479 ntTSL 216.62■□□□□ 0.251e-13■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-205ENST00000430295 440 ntTSL 220.57■□□□□ 0.889e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.7□□□□□ -0.069e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-201ENST00000413405 767 ntTSL 1 (best)13.59□□□□□ -0.239e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC11.14□□□□□ -0.639e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-207ENST00000445521 188 ntTSL 49.81□□□□□ -0.849e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-206ENST00000438202 652 ntTSL 29.71□□□□□ -0.869e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-212ENST00000623175 401 ntTSL 1 (best)9.6□□□□□ -0.879e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-211ENST00000609413 566 ntTSL 4 BASIC9.6□□□□□ -0.879e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-210ENST00000608994 315 ntTSL 59.18□□□□□ -0.949e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-203ENST00000423223 507 ntTSL 27.4□□□□□ -1.229e-7■□□□□ 10.2
SRSF1Q07955 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC5.93□□□□□ -1.469e-7■□□□□ 10.2
SRSF1Q07955 DGAT1-207ENST00000531896 981 ntTSL 322.92■■□□□ 1.269e-7■□□□□ 10.2
SRSF1Q07955 DGAT1-204ENST00000525371 840 ntTSL 519.9■□□□□ 0.789e-7■□□□□ 10.2
SRSF1Q07955 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.766e-7■□□□□ 10.2
SRSF1Q07955 SPHK1-208ENST00000591651 541 ntTSL 419.03■□□□□ 0.642e-7■□□□□ 10.2
SRSF1Q07955 CHRD-207ENST00000459711 503 ntTSL 220.4■□□□□ 0.866e-7■□□□□ 10.2
SRSF1Q07955 UBE2G2-206ENST00000481546 4340 ntTSL 1 (best)7.23□□□□□ -1.252e-8■□□□□ 10.1
SRSF1Q07955 TAF1C-206ENST00000562330 1044 ntTSL 317.39■□□□□ 0.377e-10■□□□□ 10.1
Retrieved 100 of 14,836 protein–RNA pairs in 315 ms