Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 ACAA1-205ENST00000421218 869 ntTSL 516.45■□□□□ 0.225e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.21■□□□□ 0.357e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-226ENST00000631619 2457 ntTSL 513.86□□□□□ -0.197e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-219ENST00000477127 1464 ntTSL 513.17□□□□□ -0.37e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-217ENST00000476367 1603 ntTSL 1 (best)12.99□□□□□ -0.337e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.51□□□□□ -0.577e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-212ENST00000470121 1889 ntTSL 1 (best)10.97□□□□□ -0.657e-7■□□□□ 10.3
SRSF1Q07955 CCNL1-216ENST00000475298 2362 ntTSL 1 (best)10.16□□□□□ -0.787e-7■□□□□ 10.3
SRSF1Q07955 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC26.02■■□□□ 1.765e-7■□□□□ 10.3
SRSF1Q07955 SSBP4-202ENST00000348495 1721 ntAPPRIS ALT1 TSL 2 BASIC23.4■■□□□ 1.345e-7■□□□□ 10.3
SRSF1Q07955 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.195e-7■□□□□ 10.3
SRSF1Q07955 SSBP4-203ENST00000593641 900 ntTSL 522.22■■□□□ 1.155e-7■□□□□ 10.3
SRSF1Q07955 PPP1R12C-206ENST00000590268 830 ntTSL 218.6■□□□□ 0.575e-7■□□□□ 10.3
SRSF1Q07955 TCF25-222ENST00000568412 797 ntTSL 316.95■□□□□ 0.35e-7■□□□□ 10.3
SRSF1Q07955 PPP1R12C-207ENST00000591938 1262 ntTSL 516.58■□□□□ 0.245e-7■□□□□ 10.3
SRSF1Q07955 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.355e-7■□□□□ 10.3
SRSF1Q07955 TCF25-221ENST00000568409 857 ntTSL 312.29□□□□□ -0.445e-7■□□□□ 10.3
SRSF1Q07955 TCF25-223ENST00000568870 263 ntTSL 212.29□□□□□ -0.445e-7■□□□□ 10.3
SRSF1Q07955 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC10.42□□□□□ -0.745e-7■□□□□ 10.3
SRSF1Q07955 GCN1-201ENST00000300648 8675 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.875e-7■□□□□ 10.3
SRSF1Q07955 EZR-203ENST00000392177 2933 ntAPPRIS ALT1 TSL 5 BASIC9.4□□□□□ -0.95e-7■□□□□ 10.3
SRSF1Q07955 GCN1-208ENST00000551549 258 ntTSL 29.33□□□□□ -0.925e-7■□□□□ 10.3
SRSF1Q07955 TCF25-219ENST00000566751 383 ntTSL 57.69□□□□□ -1.185e-7■□□□□ 10.3
SRSF1Q07955 CDC7-201ENST00000234626 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.615e-7■□□□□ 10.3
SRSF1Q07955 SARS-206ENST00000482384 804 ntTSL 29.42□□□□□ -0.92e-11■□□□□ 10.3
SRSF1Q07955 HNRNPH1-236ENST00000519958 885 ntTSL 511.34□□□□□ -0.592e-17■□□□□ 10.3
SRSF1Q07955 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.373e-9■□□□□ 10.3
SRSF1Q07955 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC14.41□□□□□ -0.13e-9■□□□□ 10.3
SRSF1Q07955 NPEPL1-205ENST00000527081 2061 ntTSL 213.84□□□□□ -0.193e-9■□□□□ 10.3
SRSF1Q07955 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC13.73□□□□□ -0.213e-9■□□□□ 10.3
SRSF1Q07955 NPEPL1-207ENST00000529976 4684 ntTSL 1 (best)13.4□□□□□ -0.263e-9■□□□□ 10.3
SRSF1Q07955 NPEPL1-206ENST00000527587 4633 ntTSL 512.89□□□□□ -0.353e-9■□□□□ 10.3
SRSF1Q07955 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.826e-7■□□□□ 10.3
SRSF1Q07955 NINJ1-202ENST00000461162 861 ntTSL 212.6□□□□□ -0.396e-7■□□□□ 10.3
SRSF1Q07955 NINJ1-203ENST00000470314 834 ntTSL 310.73□□□□□ -0.696e-7■□□□□ 10.3
SRSF1Q07955 NINJ1-205ENST00000490564 488 ntTSL 1 (best)9.81□□□□□ -0.846e-7■□□□□ 10.3
SRSF1Q07955 RHOT2-225ENST00000570092 674 ntTSL 323.2■■□□□ 1.33e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-204ENST00000561983 1044 ntTSL 523.19■■□□□ 1.33e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-223ENST00000569706 588 ntTSL 323.14■■□□□ 1.293e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-209ENST00000563134 736 ntTSL 222.71■■□□□ 1.233e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-214ENST00000566214 683 ntTSL 522.68■■□□□ 1.223e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-207ENST00000562708 672 ntTSL 522.68■■□□□ 1.223e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-216ENST00000567017 1094 ntTSL 522.08■■□□□ 1.133e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-226ENST00000570280 708 ntTSL 320.64■□□□□ 0.893e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-210ENST00000563637 993 ntTSL 519.56■□□□□ 0.723e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-205ENST00000562333 1052 ntTSL 518.65■□□□□ 0.583e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-211ENST00000563776 923 ntTSL 317.76■□□□□ 0.433e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-206ENST00000562598 612 ntTSL 316.57■□□□□ 0.243e-9■□□□□ 10.3
SRSF1Q07955 RHOT2-203ENST00000561929 625 ntTSL 212.68□□□□□ -0.383e-9■□□□□ 10.3
SRSF1Q07955 VARS2-202ENST00000421263 460 ntTSL 218.33■□□□□ 0.522e-10■□□□□ 10.3
SRSF1Q07955 VARS2-209ENST00000477288 6054 ntTSL 215.48■□□□□ 0.072e-10■□□□□ 10.3
SRSF1Q07955 VARS2-204ENST00000467717 863 ntTSL 315.31■□□□□ 0.042e-10■□□□□ 10.3
SRSF1Q07955 VARS2-203ENST00000428017 1103 ntTSL 213.43□□□□□ -0.262e-10■□□□□ 10.3
SRSF1Q07955 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.392e-10■□□□□ 10.3
SRSF1Q07955 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC12.01□□□□□ -0.492e-10■□□□□ 10.3
SRSF1Q07955 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC11.3□□□□□ -0.62e-10■□□□□ 10.3
SRSF1Q07955 VARS2-213ENST00000625423 3362 ntTSL 2 BASIC8.55□□□□□ -1.042e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.114e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.174e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-208ENST00000532781 2583 ntTSL 1 (best)11.16□□□□□ -0.624e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-206ENST00000466382 2699 ntTSL 29.76□□□□□ -0.854e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 59.24□□□□□ -0.934e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC9.07□□□□□ -0.964e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-217ENST00000637788 3046 nt8.3□□□□□ -1.084e-10■□□□□ 10.3
SRSF1Q07955 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC7.48□□□□□ -1.214e-10■□□□□ 10.3
SRSF1Q07955 AP1G2-220ENST00000555896 927 ntTSL 1 (best)9.61□□□□□ -0.875e-8■□□□□ 10.3
SRSF1Q07955 PRSS21-208ENST00000575199 679 ntTSL 219.8■□□□□ 0.761e-14■□□□□ 10.3
SRSF1Q07955 PRSS21-210ENST00000577043 814 ntTSL 517.12■□□□□ 0.331e-14■□□□□ 10.3
SRSF1Q07955 PRSS21-206ENST00000574265 860 ntTSL 312.09□□□□□ -0.471e-14■□□□□ 10.3
SRSF1Q07955 FAM193B-206ENST00000506432 426 ntTSL 26.96□□□□□ -1.36e-8■□□□□ 10.2
SRSF1Q07955 ACAA1-216ENST00000480865 1540 ntTSL 513.53□□□□□ -0.245e-7■□□□□ 10.2
SRSF1Q07955 ACAA1-211ENST00000452171 927 ntTSL 312.41□□□□□ -0.425e-7■□□□□ 10.2
SRSF1Q07955 ACAA1-214ENST00000469559 4720 ntTSL 29.84□□□□□ -0.835e-7■□□□□ 10.2
SRSF1Q07955 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.252e-6■□□□□ 10.2
SRSF1Q07955 MRPS5-206ENST00000475895 1672 ntTSL 214.65□□□□□ -0.062e-6■□□□□ 10.2
SRSF1Q07955 MRPS5-202ENST00000345084 1359 ntTSL 210.96□□□□□ -0.652e-6■□□□□ 10.2
SRSF1Q07955 HNRNPH1-210ENST00000504549 980 ntTSL 515.65■□□□□ 0.12e-17■□□□□ 10.2
SRSF1Q07955 HNRNPH1-205ENST00000502632 1509 ntTSL 212.92□□□□□ -0.342e-17■□□□□ 10.2
SRSF1Q07955 HNRNPH1-247ENST00000523921 584 ntTSL 210.57□□□□□ -0.722e-17■□□□□ 10.2
SRSF1Q07955 HNRNPH1-206ENST00000502904 2913 ntTSL 29.32□□□□□ -0.922e-17■□□□□ 10.2
SRSF1Q07955 HNRNPH1-227ENST00000515481 5564 ntTSL 25.13□□□□□ -1.592e-17■□□□□ 10.2
SRSF1Q07955 FBXW2-201ENST00000453291 1079 ntTSL 519.59■□□□□ 0.732e-9■□□□□ 10.2
SRSF1Q07955 FBXW2-203ENST00000476481 661 ntTSL 318.83■□□□□ 0.62e-9■□□□□ 10.2
SRSF1Q07955 FBXW2-202ENST00000474117 1062 ntTSL 515.31■□□□□ 0.042e-9■□□□□ 10.2
SRSF1Q07955 PIM2-201ENST00000376509 2075 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.712e-9■□□□□ 10.2
SRSF1Q07955 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC6.37□□□□□ -1.392e-9■□□□□ 10.2
SRSF1Q07955 TMEM259-203ENST00000586250 418 ntTSL 312.27□□□□□ -0.452e-8■□□□□ 10.2
SRSF1Q07955 PAXBP1-206ENST00000464256 1692 ntTSL 1 (best)23.02■■□□□ 1.284e-10■□□□□ 10.2
SRSF1Q07955 PAXBP1-208ENST00000472588 1410 ntTSL 1 (best)19.35■□□□□ 0.694e-10■□□□□ 10.2
SRSF1Q07955 TANGO2-219ENST00000471707 745 ntTSL 516.56■□□□□ 0.244e-7■□□□□ 10.2
SRSF1Q07955 TANGO2-223ENST00000484373 3109 ntTSL 410.58□□□□□ -0.724e-7■□□□□ 10.2
SRSF1Q07955 CANX-207ENST00000503303 345 ntTSL 57.72□□□□□ -1.171e-23■□□□□ 10.2
SRSF1Q07955 LUC7L3-203ENST00000503728 783 ntTSL 54.98□□□□□ -1.612e-7■□□□□ 10.2
SRSF1Q07955 LUC7L3-219ENST00000511974 507 ntTSL 34.44□□□□□ -1.72e-7■□□□□ 10.2
SRSF1Q07955 LUC7L3-222ENST00000513969 419 ntTSL 31.98□□□□□ -2.092e-7■□□□□ 10.2
SRSF1Q07955 RTEL1-TNFRSF6B-201ENST00000480273 5751 ntTSL 214.29□□□□□ -0.121e-6■□□□□ 10.2
SRSF1Q07955 RTEL1-206ENST00000425905 664 ntTSL 212.8□□□□□ -0.361e-6■□□□□ 10.2
SRSF1Q07955 EEF1D-217ENST00000526786 1246 ntTSL 221.38■■□□□ 1.016e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-241ENST00000531931 614 ntTSL 321.38■■□□□ 1.016e-17■□□□□ 10.2
SRSF1Q07955 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 16e-17■□□□□ 10.2
Retrieved 100 of 14,836 protein–RNA pairs in 203.1 ms