Protein–RNA interactions for Protein: Q9Z2V6

Hdac5, Histone deacetylase 5, mousemouse

Predictions only

Length 1,113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac5Q9Z2V6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC32.81■■■□□ 2.84
Hdac5Q9Z2V6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC32.8■■■□□ 2.84
Hdac5Q9Z2V6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC32.8■■■□□ 2.84
Hdac5Q9Z2V6 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Hdac5Q9Z2V6 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC32.79■■■□□ 2.84
Hdac5Q9Z2V6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC32.79■■■□□ 2.84
Hdac5Q9Z2V6 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC32.78■■■□□ 2.84
Hdac5Q9Z2V6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC32.78■■■□□ 2.84
Hdac5Q9Z2V6 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC32.77■■■□□ 2.84
Hdac5Q9Z2V6 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC32.76■■■□□ 2.83
Hdac5Q9Z2V6 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.83
Hdac5Q9Z2V6 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC32.75■■■□□ 2.83
Hdac5Q9Z2V6 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC32.74■■■□□ 2.83
Hdac5Q9Z2V6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
Hdac5Q9Z2V6 AC151971.4-201ENSMUST00000214717 704 ntBASIC32.74■■■□□ 2.83
Hdac5Q9Z2V6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Hdac5Q9Z2V6 Gm10420-201ENSMUST00000121713 882 ntBASIC32.73■■■□□ 2.83
Hdac5Q9Z2V6 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC32.73■■■□□ 2.83
Hdac5Q9Z2V6 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC32.73■■■□□ 2.83
Hdac5Q9Z2V6 Gm5067-201ENSMUST00000170449 1009 ntBASIC32.72■■■□□ 2.83
Hdac5Q9Z2V6 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC32.72■■■□□ 2.83
Hdac5Q9Z2V6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC32.71■■■□□ 2.83
Hdac5Q9Z2V6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hdac5Q9Z2V6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hdac5Q9Z2V6 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hdac5Q9Z2V6 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
Hdac5Q9Z2V6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hdac5Q9Z2V6 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC32.69■■■□□ 2.82
Hdac5Q9Z2V6 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC32.69■■■□□ 2.82
Hdac5Q9Z2V6 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hdac5Q9Z2V6 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
Hdac5Q9Z2V6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC32.68■■■□□ 2.82
Hdac5Q9Z2V6 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC32.68■■■□□ 2.82
Hdac5Q9Z2V6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC32.68■■■□□ 2.82
Hdac5Q9Z2V6 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
Hdac5Q9Z2V6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Hdac5Q9Z2V6 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC32.67■■■□□ 2.82
Hdac5Q9Z2V6 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
Hdac5Q9Z2V6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC32.66■■■□□ 2.82
Hdac5Q9Z2V6 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
Hdac5Q9Z2V6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
Hdac5Q9Z2V6 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC32.64■■■□□ 2.82
Hdac5Q9Z2V6 B230377A18Rik-202ENSMUST00000192921 1364 ntBASIC32.64■■■□□ 2.82
Hdac5Q9Z2V6 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
Hdac5Q9Z2V6 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC32.63■■■□□ 2.81
Hdac5Q9Z2V6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC32.62■■■□□ 2.81
Hdac5Q9Z2V6 Usf1-210ENSMUST00000167546 1822 ntAPPRIS P1 TSL 5 BASIC32.62■■■□□ 2.81
Hdac5Q9Z2V6 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Hdac5Q9Z2V6 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC32.61■■■□□ 2.81
Hdac5Q9Z2V6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Hdac5Q9Z2V6 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC32.61■■■□□ 2.81
Hdac5Q9Z2V6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
Hdac5Q9Z2V6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Hdac5Q9Z2V6 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC32.6■■■□□ 2.81
Hdac5Q9Z2V6 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC32.6■■■□□ 2.81
Hdac5Q9Z2V6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC32.6■■■□□ 2.81
Hdac5Q9Z2V6 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hdac5Q9Z2V6 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC32.59■■■□□ 2.81
Hdac5Q9Z2V6 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC32.58■■■□□ 2.81
Hdac5Q9Z2V6 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC32.58■■■□□ 2.81
Hdac5Q9Z2V6 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC32.58■■■□□ 2.81
Hdac5Q9Z2V6 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC32.57■■■□□ 2.8
Hdac5Q9Z2V6 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC32.57■■■□□ 2.8
Hdac5Q9Z2V6 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC32.57■■■□□ 2.8
Hdac5Q9Z2V6 Zfp131-206ENSMUST00000223813 2561 ntAPPRIS P3 BASIC32.57■■■□□ 2.8
Hdac5Q9Z2V6 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC32.56■■■□□ 2.8
Hdac5Q9Z2V6 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
Hdac5Q9Z2V6 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
Hdac5Q9Z2V6 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
Hdac5Q9Z2V6 Tmem11-201ENSMUST00000062677 1457 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 AC117769.4-201ENSMUST00000225679 685 ntBASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
Hdac5Q9Z2V6 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC32.53■■■□□ 2.8
Hdac5Q9Z2V6 Usp2-206ENSMUST00000176416 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC32.53■■■□□ 2.8
Hdac5Q9Z2V6 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
Hdac5Q9Z2V6 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac5Q9Z2V6 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac5Q9Z2V6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac5Q9Z2V6 D17Wsu92e-201ENSMUST00000075076 1470 ntTSL 1 (best) BASIC32.52■■■□□ 2.8
Hdac5Q9Z2V6 Slc16a11-207ENSMUST00000136328 1403 ntTSL 5 BASIC32.51■■■□□ 2.8
Hdac5Q9Z2V6 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hdac5Q9Z2V6 Tmem106c-201ENSMUST00000064200 1635 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
Hdac5Q9Z2V6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC32.5■■■□□ 2.79
Hdac5Q9Z2V6 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hdac5Q9Z2V6 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hdac5Q9Z2V6 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC32.5■■■□□ 2.79
Hdac5Q9Z2V6 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC32.5■■■□□ 2.79
Hdac5Q9Z2V6 Runx2-211ENSMUST00000162629 1607 ntAPPRIS ALT2 TSL 5 BASIC32.48■■■□□ 2.79
Hdac5Q9Z2V6 Gm5921-201ENSMUST00000075898 882 ntBASIC32.47■■■□□ 2.79
Hdac5Q9Z2V6 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC32.47■■■□□ 2.79
Hdac5Q9Z2V6 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hdac5Q9Z2V6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Hdac5Q9Z2V6 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC32.46■■■□□ 2.79
Hdac5Q9Z2V6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC32.46■■■□□ 2.79
Hdac5Q9Z2V6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC32.46■■■□□ 2.79
Hdac5Q9Z2V6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC32.45■■■□□ 2.79
Hdac5Q9Z2V6 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC32.44■■■□□ 2.78
Retrieved 100 of 76,532 protein–RNA pairs in 9.1 ms