Protein–RNA interactions for Protein: Q9Z1E3

Nfkbia, NF-kappa-B inhibitor alpha, mousemouse

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NfkbiaQ9Z1E3 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
NfkbiaQ9Z1E3 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
NfkbiaQ9Z1E3 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Psme4-201ENSMUST00000041231 6491 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
NfkbiaQ9Z1E3 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
NfkbiaQ9Z1E3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
NfkbiaQ9Z1E3 Dpy19l1-206ENSMUST00000170356 4715 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
NfkbiaQ9Z1E3 Fbxl17-201ENSMUST00000024761 4925 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Gm11687-201ENSMUST00000118911 886 ntBASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.59■■□□□ 1.05
NfkbiaQ9Z1E3 Agap2-201ENSMUST00000039259 5633 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
NfkbiaQ9Z1E3 Gm9806-201ENSMUST00000051080 552 ntBASIC21.58■■□□□ 1.05
NfkbiaQ9Z1E3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC21.58■■□□□ 1.05
NfkbiaQ9Z1E3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
NfkbiaQ9Z1E3 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.58■■□□□ 1.04
NfkbiaQ9Z1E3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.57■■□□□ 1.04
NfkbiaQ9Z1E3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
NfkbiaQ9Z1E3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
NfkbiaQ9Z1E3 Dapk1-202ENSMUST00000077453 5491 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NfkbiaQ9Z1E3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
NfkbiaQ9Z1E3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.56■■□□□ 1.04
NfkbiaQ9Z1E3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
NfkbiaQ9Z1E3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
NfkbiaQ9Z1E3 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
NfkbiaQ9Z1E3 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NfkbiaQ9Z1E3 Gm4799-201ENSMUST00000095396 657 ntBASIC21.55■■□□□ 1.04
NfkbiaQ9Z1E3 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NfkbiaQ9Z1E3 Gas2l1-201ENSMUST00000037146 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
NfkbiaQ9Z1E3 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
NfkbiaQ9Z1E3 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC21.54■■□□□ 1.04
NfkbiaQ9Z1E3 Nckap1-201ENSMUST00000028386 4469 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NfkbiaQ9Z1E3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
NfkbiaQ9Z1E3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.54■■□□□ 1.04
NfkbiaQ9Z1E3 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 Zranb1-202ENSMUST00000106157 5008 ntAPPRIS P2 TSL 5 BASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.53■■□□□ 1.04
NfkbiaQ9Z1E3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
NfkbiaQ9Z1E3 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
NfkbiaQ9Z1E3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.52■■□□□ 1.03
NfkbiaQ9Z1E3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC21.51■■□□□ 1.03
NfkbiaQ9Z1E3 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Gm12366-201ENSMUST00000121722 873 ntBASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Gm5786-201ENSMUST00000085368 882 ntBASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
NfkbiaQ9Z1E3 Macrod2-206ENSMUST00000110064 4883 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
NfkbiaQ9Z1E3 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbiaQ9Z1E3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.48■■□□□ 1.03
NfkbiaQ9Z1E3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
NfkbiaQ9Z1E3 Dirc2-201ENSMUST00000023554 5395 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbiaQ9Z1E3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
NfkbiaQ9Z1E3 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
NfkbiaQ9Z1E3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.45■■□□□ 1.02
NfkbiaQ9Z1E3 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbiaQ9Z1E3 Slc12a2-201ENSMUST00000115366 6520 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbiaQ9Z1E3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC21.45■■□□□ 1.02
NfkbiaQ9Z1E3 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
NfkbiaQ9Z1E3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbiaQ9Z1E3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbiaQ9Z1E3 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
NfkbiaQ9Z1E3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
NfkbiaQ9Z1E3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 75.4 ms