Protein–RNA interactions for Protein: Q9Y5H6

PCDHA8, Protocadherin alpha-8, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA8Q9Y5H6 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC28.77■■■□□ 2.2
PCDHA8Q9Y5H6 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHA8Q9Y5H6 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHA8Q9Y5H6 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28.76■■■□□ 2.19
PCDHA8Q9Y5H6 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC28.76■■■□□ 2.19
PCDHA8Q9Y5H6 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
PCDHA8Q9Y5H6 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHA8Q9Y5H6 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC28.74■■■□□ 2.19
PCDHA8Q9Y5H6 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 HSD17B1P1-201ENST00000590052 955 ntBASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
PCDHA8Q9Y5H6 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC28.71■■■□□ 2.19
PCDHA8Q9Y5H6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.71■■■□□ 2.19
PCDHA8Q9Y5H6 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHA8Q9Y5H6 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHA8Q9Y5H6 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC28.71■■■□□ 2.19
PCDHA8Q9Y5H6 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC28.7■■■□□ 2.19
PCDHA8Q9Y5H6 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC28.7■■■□□ 2.18
PCDHA8Q9Y5H6 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC28.7■■■□□ 2.18
PCDHA8Q9Y5H6 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHA8Q9Y5H6 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHA8Q9Y5H6 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHA8Q9Y5H6 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC28.69■■■□□ 2.18
PCDHA8Q9Y5H6 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC28.69■■■□□ 2.18
PCDHA8Q9Y5H6 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC28.67■■■□□ 2.18
PCDHA8Q9Y5H6 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA8Q9Y5H6 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.66■■■□□ 2.18
PCDHA8Q9Y5H6 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA8Q9Y5H6 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC28.66■■■□□ 2.18
PCDHA8Q9Y5H6 GPX1-201ENST00000419349 1106 ntBASIC28.65■■■□□ 2.18
PCDHA8Q9Y5H6 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.64■■■□□ 2.18
PCDHA8Q9Y5H6 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC28.64■■■□□ 2.18
PCDHA8Q9Y5H6 AC022413.1-201ENST00000624602 984 ntBASIC28.64■■■□□ 2.18
PCDHA8Q9Y5H6 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC28.63■■■□□ 2.17
PCDHA8Q9Y5H6 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 MED25-210ENST00000612854 801 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 MED25-213ENST00000620467 1293 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 MED25-214ENST00000622402 642 ntTSL 5 BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 SHF-208ENST00000560734 1731 ntTSL 3 BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC28.62■■■□□ 2.17
PCDHA8Q9Y5H6 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA8Q9Y5H6 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC28.61■■■□□ 2.17
PCDHA8Q9Y5H6 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
PCDHA8Q9Y5H6 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC28.6■■■□□ 2.17
PCDHA8Q9Y5H6 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC28.59■■■□□ 2.17
PCDHA8Q9Y5H6 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA8Q9Y5H6 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC28.58■■■□□ 2.17
PCDHA8Q9Y5H6 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC28.58■■■□□ 2.17
PCDHA8Q9Y5H6 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.58■■■□□ 2.17
PCDHA8Q9Y5H6 AC060814.1-201ENST00000554326 538 ntBASIC28.58■■■□□ 2.17
PCDHA8Q9Y5H6 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 BRD4-212ENST00000630599 726 ntTSL 2 BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC28.57■■■□□ 2.16
PCDHA8Q9Y5H6 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC28.56■■■□□ 2.16
PCDHA8Q9Y5H6 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC28.56■■■□□ 2.16
PCDHA8Q9Y5H6 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHA8Q9Y5H6 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC28.55■■■□□ 2.16
PCDHA8Q9Y5H6 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC28.55■■■□□ 2.16
PCDHA8Q9Y5H6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.55■■■□□ 2.16
PCDHA8Q9Y5H6 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC28.55■■■□□ 2.16
PCDHA8Q9Y5H6 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC28.54■■■□□ 2.16
PCDHA8Q9Y5H6 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
PCDHA8Q9Y5H6 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC28.54■■■□□ 2.16
PCDHA8Q9Y5H6 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.54■■■□□ 2.16
PCDHA8Q9Y5H6 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.54■■■□□ 2.16
PCDHA8Q9Y5H6 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC28.53■■■□□ 2.16
Retrieved 100 of 98,524 protein–RNA pairs in 20.9 ms