Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
ZC3H4Q9UPT8 HYI-210ENST00000486909 905 ntTSL 5 BASIC30.81■■■□□ 2.52
ZC3H4Q9UPT8 RAP2CP1-202ENST00000605179 643 ntBASIC30.81■■■□□ 2.52
ZC3H4Q9UPT8 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC30.81■■■□□ 2.52
ZC3H4Q9UPT8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC30.81■■■□□ 2.52
ZC3H4Q9UPT8 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 SPCS2P3-201ENST00000500401 656 ntBASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 MIR6765-201ENST00000614092 87 ntBASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 SEPT3-203ENST00000396426 2586 ntAPPRIS P4 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
ZC3H4Q9UPT8 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC30.79■■■□□ 2.52
ZC3H4Q9UPT8 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC30.79■■■□□ 2.52
ZC3H4Q9UPT8 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC30.79■■■□□ 2.52
ZC3H4Q9UPT8 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
ZC3H4Q9UPT8 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC30.78■■■□□ 2.52
ZC3H4Q9UPT8 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
ZC3H4Q9UPT8 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC30.78■■■□□ 2.52
ZC3H4Q9UPT8 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC30.78■■■□□ 2.52
ZC3H4Q9UPT8 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 ST7-205ENST00000393446 2114 ntTSL 5 BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 LSM7-203ENST00000585409 512 ntTSL 2 BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.77■■■□□ 2.52
ZC3H4Q9UPT8 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC30.76■■■□□ 2.52
ZC3H4Q9UPT8 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
ZC3H4Q9UPT8 PVT1_1.1-201ENST00000615125 194 ntBASIC30.75■■■□□ 2.51
ZC3H4Q9UPT8 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
ZC3H4Q9UPT8 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC30.74■■■□□ 2.51
ZC3H4Q9UPT8 PRTG-204ENST00000561292 833 ntTSL 3 BASIC30.74■■■□□ 2.51
ZC3H4Q9UPT8 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC30.74■■■□□ 2.51
ZC3H4Q9UPT8 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.74■■■□□ 2.51
ZC3H4Q9UPT8 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC30.74■■■□□ 2.51
ZC3H4Q9UPT8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 AC093536.1-201ENST00000569153 554 ntBASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC30.73■■■□□ 2.51
ZC3H4Q9UPT8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC30.72■■■□□ 2.51
ZC3H4Q9UPT8 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC30.72■■■□□ 2.51
ZC3H4Q9UPT8 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
ZC3H4Q9UPT8 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZC3H4Q9UPT8 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZC3H4Q9UPT8 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
ZC3H4Q9UPT8 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC30.71■■■□□ 2.51
ZC3H4Q9UPT8 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC30.7■■■□□ 2.5
ZC3H4Q9UPT8 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 AL031848.2-201ENST00000607670 837 ntBASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
ZC3H4Q9UPT8 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H4Q9UPT8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
ZC3H4Q9UPT8 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H4Q9UPT8 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H4Q9UPT8 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.68■■■□□ 2.5
ZC3H4Q9UPT8 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 AC103724.3-201ENST00000564481 992 ntBASIC30.67■■■□□ 2.5
ZC3H4Q9UPT8 IDNK-201ENST00000376417 511 ntTSL 5 BASIC30.66■■■□□ 2.5
ZC3H4Q9UPT8 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
ZC3H4Q9UPT8 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC30.66■■■□□ 2.5
ZC3H4Q9UPT8 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 AC008406.3-201ENST00000620001 1374 ntBASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 LINC01233-202ENST00000598832 568 ntTSL 2 BASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC30.65■■■□□ 2.5
ZC3H4Q9UPT8 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC30.64■■■□□ 2.5
ZC3H4Q9UPT8 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC30.64■■■□□ 2.49
ZC3H4Q9UPT8 AL359258.2-201ENST00000564063 1566 ntBASIC30.63■■■□□ 2.49
ZC3H4Q9UPT8 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC30.63■■■□□ 2.49
ZC3H4Q9UPT8 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
ZC3H4Q9UPT8 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
ZC3H4Q9UPT8 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ZC3H4Q9UPT8 AC018755.3-202ENST00000596210 929 ntBASIC30.61■■■□□ 2.49
ZC3H4Q9UPT8 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
ZC3H4Q9UPT8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
ZC3H4Q9UPT8 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
ZC3H4Q9UPT8 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.6■■■□□ 2.49
ZC3H4Q9UPT8 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC30.6■■■□□ 2.49
ZC3H4Q9UPT8 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC30.6■■■□□ 2.49
ZC3H4Q9UPT8 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.6■■■□□ 2.49
ZC3H4Q9UPT8 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 RASSF7-202ENST00000397583 1928 ntAPPRIS P3 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 IDNK-203ENST00000405990 629 ntTSL 2 BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC30.59■■■□□ 2.49
ZC3H4Q9UPT8 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC30.58■■■□□ 2.49
ZC3H4Q9UPT8 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.58■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms