Protein–RNA interactions for Protein: Q9UL40

ZNF346, Zinc finger protein 346, humanhuman

Known RBP Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF346Q9UL40 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
ZNF346Q9UL40 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.38■■□□□ 1.17
ZNF346Q9UL40 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
ZNF346Q9UL40 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC22.38■■□□□ 1.17
ZNF346Q9UL40 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC22.38■■□□□ 1.17
ZNF346Q9UL40 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.37■■□□□ 1.17
ZNF346Q9UL40 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
ZNF346Q9UL40 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
ZNF346Q9UL40 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
ZNF346Q9UL40 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 ZNRF2P2-203ENST00000454624 420 ntBASIC22.34■■□□□ 1.17
ZNF346Q9UL40 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
ZNF346Q9UL40 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZNF346Q9UL40 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZNF346Q9UL40 CREM-210ENST00000374721 2020 ntTSL 5 BASIC22.33■■□□□ 1.17
ZNF346Q9UL40 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
ZNF346Q9UL40 MIR7108-201ENST00000614319 87 ntBASIC22.33■■□□□ 1.17
ZNF346Q9UL40 LINC01971-201ENST00000617888 1048 ntBASIC22.33■■□□□ 1.17
ZNF346Q9UL40 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.17
ZNF346Q9UL40 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
ZNF346Q9UL40 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC22.32■■□□□ 1.16
ZNF346Q9UL40 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC22.32■■□□□ 1.16
ZNF346Q9UL40 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.31■■□□□ 1.16
ZNF346Q9UL40 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZNF346Q9UL40 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
ZNF346Q9UL40 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZNF346Q9UL40 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC22.3■■□□□ 1.16
ZNF346Q9UL40 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC22.3■■□□□ 1.16
ZNF346Q9UL40 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.3■■□□□ 1.16
ZNF346Q9UL40 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
ZNF346Q9UL40 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
ZNF346Q9UL40 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
ZNF346Q9UL40 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
ZNF346Q9UL40 RPS2-210ENST00000530225 765 ntTSL 2 BASIC22.28■■□□□ 1.16
ZNF346Q9UL40 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC22.28■■□□□ 1.16
ZNF346Q9UL40 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC22.28■■□□□ 1.16
ZNF346Q9UL40 AL449106.1-201ENST00000608517 1980 ntBASIC22.28■■□□□ 1.16
ZNF346Q9UL40 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZNF346Q9UL40 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.27■■□□□ 1.16
ZNF346Q9UL40 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ZNF346Q9UL40 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ZNF346Q9UL40 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC22.26■■□□□ 1.15
ZNF346Q9UL40 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L13-201ENST00000554103 1267 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L15-201ENST00000611059 1267 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L23-201ENST00000615195 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L24-201ENST00000617576 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L22-201ENST00000618238 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L20-201ENST00000619712 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L21-201ENST00000622058 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L10-201ENST00000622460 1267 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 DUX4L25-201ENST00000624915 1269 ntBASIC22.26■■□□□ 1.15
ZNF346Q9UL40 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF346Q9UL40 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF346Q9UL40 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF346Q9UL40 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
ZNF346Q9UL40 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ZNF346Q9UL40 DUX4L11-201ENST00000611504 1267 ntBASIC22.24■■□□□ 1.15
ZNF346Q9UL40 DUX4L12-201ENST00000614593 1267 ntBASIC22.24■■□□□ 1.15
ZNF346Q9UL40 DUX4L14-201ENST00000621227 1267 ntBASIC22.24■■□□□ 1.15
ZNF346Q9UL40 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC22.23■■□□□ 1.15
ZNF346Q9UL40 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC22.23■■□□□ 1.15
ZNF346Q9UL40 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.23■■□□□ 1.15
ZNF346Q9UL40 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC22.23■■□□□ 1.15
ZNF346Q9UL40 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ZNF346Q9UL40 ANKS3-203ENST00000450067 2272 ntTSL 5 BASIC22.22■■□□□ 1.15
ZNF346Q9UL40 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZNF346Q9UL40 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
ZNF346Q9UL40 AP004609.3-201ENST00000610705 1884 ntBASIC22.22■■□□□ 1.15
ZNF346Q9UL40 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ZNF346Q9UL40 WHAMMP3-201ENST00000611636 1609 ntBASIC22.21■■□□□ 1.15
ZNF346Q9UL40 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ZNF346Q9UL40 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.21■■□□□ 1.15
ZNF346Q9UL40 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
ZNF346Q9UL40 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
ZNF346Q9UL40 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC22.2■■□□□ 1.14
ZNF346Q9UL40 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.2■■□□□ 1.14
ZNF346Q9UL40 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ZNF346Q9UL40 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms