Protein–RNA interactions for Protein: Q9R1R0

Lhx6, LIM/homeobox protein Lhx6, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx6Q9R1R0 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Lhx6Q9R1R0 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Lhx6Q9R1R0 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC21.2■□□□□ 0.98
Lhx6Q9R1R0 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC21.2■□□□□ 0.98
Lhx6Q9R1R0 5830487J09Rik-201ENSMUST00000198600 1256 ntTSL 5 BASIC21.2■□□□□ 0.98
Lhx6Q9R1R0 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 Camk2n2-201ENSMUST00000052939 1291 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 Clk2-203ENSMUST00000121931 2112 ntAPPRIS ALT1 TSL 5 BASIC21.19■□□□□ 0.98
Lhx6Q9R1R0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Cdc42ep5-201ENSMUST00000076831 1025 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Lhx6Q9R1R0 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Lhx6Q9R1R0 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx6Q9R1R0 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx6Q9R1R0 AC153890.1-201ENSMUST00000220021 2469 ntBASIC21.17■□□□□ 0.98
Lhx6Q9R1R0 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Lhx6Q9R1R0 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx6Q9R1R0 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx6Q9R1R0 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx6Q9R1R0 Fkbp1b-201ENSMUST00000020964 976 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Lhx6Q9R1R0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx6Q9R1R0 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Lhx6Q9R1R0 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC21.15■□□□□ 0.98
Lhx6Q9R1R0 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx6Q9R1R0 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Lhx6Q9R1R0 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.14■□□□□ 0.98
Lhx6Q9R1R0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC21.14■□□□□ 0.97
Lhx6Q9R1R0 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Lhx6Q9R1R0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx6Q9R1R0 AC166358.2-201ENSMUST00000223403 734 ntTSL 5 BASIC21.13■□□□□ 0.97
Lhx6Q9R1R0 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Lhx6Q9R1R0 Ipmk-202ENSMUST00000118381 1323 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx6Q9R1R0 Tmem120b-202ENSMUST00000111619 1256 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Lhx6Q9R1R0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC21.12■□□□□ 0.97
Lhx6Q9R1R0 Gm9910-201ENSMUST00000195385 1550 ntBASIC21.11■□□□□ 0.97
Lhx6Q9R1R0 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx6Q9R1R0 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Lhx6Q9R1R0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC21.11■□□□□ 0.97
Lhx6Q9R1R0 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Gt(ROSA)26Sor-201ENSMUST00000124246 1181 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Dleu2-201ENSMUST00000180377 1165 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Gm45444-201ENSMUST00000211394 898 ntBASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Lhx6Q9R1R0 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx6Q9R1R0 Gm42501-201ENSMUST00000200220 1026 ntBASIC21.09■□□□□ 0.97
Lhx6Q9R1R0 Gm9959-201ENSMUST00000068277 390 ntBASIC21.09■□□□□ 0.97
Lhx6Q9R1R0 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
Lhx6Q9R1R0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Lhx6Q9R1R0 AC151971.4-201ENSMUST00000214717 704 ntBASIC21.08■□□□□ 0.97
Lhx6Q9R1R0 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Lhx6Q9R1R0 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx6Q9R1R0 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx6Q9R1R0 Becn1-216ENSMUST00000170502 725 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx6Q9R1R0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Lhx6Q9R1R0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx6Q9R1R0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx6Q9R1R0 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Lhx6Q9R1R0 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Lhx6Q9R1R0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC21.04■□□□□ 0.96
Lhx6Q9R1R0 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.04■□□□□ 0.96
Lhx6Q9R1R0 Mypop-203ENSMUST00000131087 1951 ntAPPRIS P1 TSL 5 BASIC21.03■□□□□ 0.96
Lhx6Q9R1R0 Hoxd11-202ENSMUST00000142312 1111 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Lhx6Q9R1R0 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.02■□□□□ 0.96
Lhx6Q9R1R0 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Lhx6Q9R1R0 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Lhx6Q9R1R0 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx6Q9R1R0 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Lhx6Q9R1R0 Gm13238-201ENSMUST00000117655 780 ntBASIC21■□□□□ 0.95
Lhx6Q9R1R0 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lhx6Q9R1R0 Gm43566-201ENSMUST00000196851 808 ntBASIC21■□□□□ 0.95
Lhx6Q9R1R0 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC21■□□□□ 0.95
Lhx6Q9R1R0 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC21■□□□□ 0.95
Lhx6Q9R1R0 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx6Q9R1R0 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx6Q9R1R0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx6Q9R1R0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx6Q9R1R0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Lhx6Q9R1R0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC20.98■□□□□ 0.95
Lhx6Q9R1R0 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.98■□□□□ 0.95
Lhx6Q9R1R0 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx6Q9R1R0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Lhx6Q9R1R0 Pgls-205ENSMUST00000143441 1062 ntTSL 3 BASIC20.97■□□□□ 0.95
Lhx6Q9R1R0 Gm37444-201ENSMUST00000193605 439 ntBASIC20.97■□□□□ 0.95
Lhx6Q9R1R0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC20.96■□□□□ 0.95
Lhx6Q9R1R0 Gm37136-201ENSMUST00000194368 194 ntBASIC20.96■□□□□ 0.95
Lhx6Q9R1R0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC20.96■□□□□ 0.95
Lhx6Q9R1R0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 9.3 ms