Protein–RNA interactions for Protein: Q9QZM3

Clcf1, Cardiotrophin-like cytokine factor 1, mousemouse

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcf1Q9QZM3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
Clcf1Q9QZM3 Gm11687-201ENSMUST00000118911 886 ntBASIC20.46■□□□□ 0.87
Clcf1Q9QZM3 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Clcf1Q9QZM3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcf1Q9QZM3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcf1Q9QZM3 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcf1Q9QZM3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Clcf1Q9QZM3 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Clcf1Q9QZM3 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Clcf1Q9QZM3 Gm9812-201ENSMUST00000061934 968 ntBASIC20.44■□□□□ 0.86
Clcf1Q9QZM3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcf1Q9QZM3 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Clcf1Q9QZM3 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Gm16437-201ENSMUST00000025669 507 ntBASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Clcf1Q9QZM3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcf1Q9QZM3 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.42■□□□□ 0.86
Clcf1Q9QZM3 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC20.42■□□□□ 0.86
Clcf1Q9QZM3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
Clcf1Q9QZM3 Cap2-205ENSMUST00000225824 1634 ntBASIC20.4■□□□□ 0.86
Clcf1Q9QZM3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Clcf1Q9QZM3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
Clcf1Q9QZM3 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
Clcf1Q9QZM3 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.37■□□□□ 0.85
Clcf1Q9QZM3 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
Clcf1Q9QZM3 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcf1Q9QZM3 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcf1Q9QZM3 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Clcf1Q9QZM3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Clcf1Q9QZM3 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
Clcf1Q9QZM3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcf1Q9QZM3 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.35■□□□□ 0.85
Clcf1Q9QZM3 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Clcf1Q9QZM3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC20.34■□□□□ 0.85
Clcf1Q9QZM3 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC20.34■□□□□ 0.85
Clcf1Q9QZM3 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcf1Q9QZM3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Clcf1Q9QZM3 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Clcf1Q9QZM3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Clcf1Q9QZM3 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Clcf1Q9QZM3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Clcf1Q9QZM3 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcf1Q9QZM3 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.31■□□□□ 0.84
Clcf1Q9QZM3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcf1Q9QZM3 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Clcf1Q9QZM3 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Clcf1Q9QZM3 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcf1Q9QZM3 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Clcf1Q9QZM3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Clcf1Q9QZM3 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
Clcf1Q9QZM3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcf1Q9QZM3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Clcf1Q9QZM3 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.29■□□□□ 0.84
Clcf1Q9QZM3 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC20.29■□□□□ 0.84
Clcf1Q9QZM3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcf1Q9QZM3 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcf1Q9QZM3 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Clcf1Q9QZM3 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Clcf1Q9QZM3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.28■□□□□ 0.84
Clcf1Q9QZM3 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Clcf1Q9QZM3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms