Protein–RNA interactions for Protein: Q9NWB1

RBFOX1, RNA binding protein fox-1 homolog 1, humanhuman

Known RBP Predictions only

Length 397 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1Q9NWB1 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
RBFOX1Q9NWB1 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC21.84■■□□□ 1.09
RBFOX1Q9NWB1 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
RBFOX1Q9NWB1 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.83■■□□□ 1.08
RBFOX1Q9NWB1 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 DUX4L28-201ENST00000623687 678 ntBASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.82■■□□□ 1.08
RBFOX1Q9NWB1 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
RBFOX1Q9NWB1 RALY-201ENST00000246194 1789 ntAPPRIS P4 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
RBFOX1Q9NWB1 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
RBFOX1Q9NWB1 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
RBFOX1Q9NWB1 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
RBFOX1Q9NWB1 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.77■■□□□ 1.07
RBFOX1Q9NWB1 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 HMCES-202ENST00000389735 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
RBFOX1Q9NWB1 AC108673.1-201ENST00000510422 1159 ntBASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 MIR3665-201ENST00000578708 105 ntBASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC21.75■■□□□ 1.07
RBFOX1Q9NWB1 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 AC100797.4-201ENST00000631653 1827 ntBASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 MIR6090-201ENST00000622481 60 ntBASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC21.74■■□□□ 1.07
RBFOX1Q9NWB1 THRA-202ENST00000394121 2260 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC21.73■■□□□ 1.07
RBFOX1Q9NWB1 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
RBFOX1Q9NWB1 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 AP006261.1-201ENST00000584783 668 ntBASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
RBFOX1Q9NWB1 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.7■■□□□ 1.06
RBFOX1Q9NWB1 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
RBFOX1Q9NWB1 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 RNF19B-203ENST00000373456 2560 ntAPPRIS P3 TSL 1 (best) BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 DUSP8P4-201ENST00000399538 1761 ntBASIC21.68■■□□□ 1.06
RBFOX1Q9NWB1 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
RBFOX1Q9NWB1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms