Protein–RNA interactions for Protein: Q9HBD1

RC3H2, Roquin-2, humanhuman

Known RBP Predictions only

Length 1,191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H2Q9HBD1 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC27.09■■□□□ 1.93
RC3H2Q9HBD1 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC27.08■■□□□ 1.93
RC3H2Q9HBD1 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC27.08■■□□□ 1.93
RC3H2Q9HBD1 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC27.08■■□□□ 1.93
RC3H2Q9HBD1 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H2Q9HBD1 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC27.07■■□□□ 1.92
RC3H2Q9HBD1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC27.07■■□□□ 1.92
RC3H2Q9HBD1 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC27.06■■□□□ 1.92
RC3H2Q9HBD1 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC27.05■■□□□ 1.92
RC3H2Q9HBD1 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC27.05■■□□□ 1.92
RC3H2Q9HBD1 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.05■■□□□ 1.92
RC3H2Q9HBD1 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC27.05■■□□□ 1.92
RC3H2Q9HBD1 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC27.05■■□□□ 1.92
RC3H2Q9HBD1 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC27.04■■□□□ 1.92
RC3H2Q9HBD1 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC27.04■■□□□ 1.92
RC3H2Q9HBD1 AL451085.2-201ENST00000605085 799 ntBASIC27.04■■□□□ 1.92
RC3H2Q9HBD1 DUX4L9-201ENST00000449051 1259 ntBASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 RAP2CP1-202ENST00000605179 643 ntBASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 AL035685.1-201ENST00000636663 812 ntBASIC27.03■■□□□ 1.92
RC3H2Q9HBD1 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC27.02■■□□□ 1.92
RC3H2Q9HBD1 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 RP9P-202ENST00000450133 1212 ntBASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC27.01■■□□□ 1.91
RC3H2Q9HBD1 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC27■■□□□ 1.91
RC3H2Q9HBD1 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC27■■□□□ 1.91
RC3H2Q9HBD1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27■■□□□ 1.91
RC3H2Q9HBD1 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC26.99■■□□□ 1.91
RC3H2Q9HBD1 SPCS2P3-201ENST00000500401 656 ntBASIC26.99■■□□□ 1.91
RC3H2Q9HBD1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.99■■□□□ 1.91
RC3H2Q9HBD1 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC26.99■■□□□ 1.91
RC3H2Q9HBD1 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 AC093536.1-201ENST00000569153 554 ntBASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC26.98■■□□□ 1.91
RC3H2Q9HBD1 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.97■■□□□ 1.91
RC3H2Q9HBD1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.97■■□□□ 1.91
RC3H2Q9HBD1 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC26.97■■□□□ 1.91
RC3H2Q9HBD1 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
RC3H2Q9HBD1 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC26.96■■□□□ 1.91
RC3H2Q9HBD1 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RC3H2Q9HBD1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
RC3H2Q9HBD1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
RC3H2Q9HBD1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.94■■□□□ 1.9
RC3H2Q9HBD1 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC26.94■■□□□ 1.9
RC3H2Q9HBD1 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC26.94■■□□□ 1.9
RC3H2Q9HBD1 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC26.93■■□□□ 1.9
RC3H2Q9HBD1 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.92■■□□□ 1.9
RC3H2Q9HBD1 PFN2-211ENST00000489155 636 ntTSL 4 BASIC26.92■■□□□ 1.9
RC3H2Q9HBD1 TRIR-205ENST00000592273 783 ntTSL 3 BASIC26.92■■□□□ 1.9
RC3H2Q9HBD1 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC26.91■■□□□ 1.9
RC3H2Q9HBD1 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC26.91■■□□□ 1.9
RC3H2Q9HBD1 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H2Q9HBD1 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC26.9■■□□□ 1.9
RC3H2Q9HBD1 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC26.9■■□□□ 1.9
RC3H2Q9HBD1 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC26.9■■□□□ 1.9
RC3H2Q9HBD1 AC008105.2-203ENST00000591361 550 ntTSL 4 BASIC26.9■■□□□ 1.9
RC3H2Q9HBD1 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RC3H2Q9HBD1 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC26.89■■□□□ 1.9
RC3H2Q9HBD1 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC26.89■■□□□ 1.9
RC3H2Q9HBD1 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
RC3H2Q9HBD1 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC26.89■■□□□ 1.89
RC3H2Q9HBD1 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H2Q9HBD1 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC26.88■■□□□ 1.89
RC3H2Q9HBD1 AC010980.1-201ENST00000587192 1142 ntBASIC26.88■■□□□ 1.89
RC3H2Q9HBD1 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.89
RC3H2Q9HBD1 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC26.88■■□□□ 1.89
RC3H2Q9HBD1 TNFRSF25-205ENST00000377782 1632 ntAPPRIS P4 TSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H2Q9HBD1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
RC3H2Q9HBD1 MIR3960-201ENST00000583311 91 ntBASIC26.87■■□□□ 1.89
RC3H2Q9HBD1 AC074183.2-201ENST00000623112 922 ntBASIC26.87■■□□□ 1.89
RC3H2Q9HBD1 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H2Q9HBD1 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H2Q9HBD1 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.86■■□□□ 1.89
RC3H2Q9HBD1 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H2Q9HBD1 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC26.85■■□□□ 1.89
RC3H2Q9HBD1 AL139393.2-201ENST00000608721 2025 ntBASIC26.85■■□□□ 1.89
RC3H2Q9HBD1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms