Protein–RNA interactions for Protein: Q9H3S7

PTPN23, Tyrosine-protein phosphatase non-receptor type 23, humanhuman

Predictions only

Length 1,636 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN23Q9H3S7 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
PTPN23Q9H3S7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC38.22■■■■□ 3.71
PTPN23Q9H3S7 AC012354.3-201ENST00000623734 483 ntBASIC38.22■■■■□ 3.71
PTPN23Q9H3S7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC38.22■■■■□ 3.71
PTPN23Q9H3S7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC38.2■■■■□ 3.71
PTPN23Q9H3S7 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
PTPN23Q9H3S7 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC38.2■■■■□ 3.71
PTPN23Q9H3S7 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC38.2■■■■□ 3.71
PTPN23Q9H3S7 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC38.2■■■■□ 3.71
PTPN23Q9H3S7 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC38.2■■■■□ 3.7
PTPN23Q9H3S7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC38.19■■■■□ 3.7
PTPN23Q9H3S7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
PTPN23Q9H3S7 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC38.19■■■■□ 3.7
PTPN23Q9H3S7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC38.18■■■■□ 3.7
PTPN23Q9H3S7 KRT18P60-201ENST00000312876 1297 ntBASIC38.18■■■■□ 3.7
PTPN23Q9H3S7 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC38.18■■■■□ 3.7
PTPN23Q9H3S7 AC007029.1-201ENST00000604183 313 ntBASIC38.18■■■■□ 3.7
PTPN23Q9H3S7 AC025884.2-201ENST00000553429 711 ntBASIC38.17■■■■□ 3.7
PTPN23Q9H3S7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC38.17■■■■□ 3.7
PTPN23Q9H3S7 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
PTPN23Q9H3S7 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC38.16■■■■□ 3.7
PTPN23Q9H3S7 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC38.15■■■■□ 3.7
PTPN23Q9H3S7 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC38.15■■■■□ 3.7
PTPN23Q9H3S7 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC38.14■■■■□ 3.7
PTPN23Q9H3S7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC38.14■■■■□ 3.7
PTPN23Q9H3S7 AL359258.2-201ENST00000564063 1566 ntBASIC38.14■■■■□ 3.7
PTPN23Q9H3S7 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
PTPN23Q9H3S7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC38.13■■■■□ 3.69
PTPN23Q9H3S7 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC38.12■■■■□ 3.69
PTPN23Q9H3S7 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC38.12■■■■□ 3.69
PTPN23Q9H3S7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC38.12■■■■□ 3.69
PTPN23Q9H3S7 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC38.11■■■■□ 3.69
PTPN23Q9H3S7 CLEC11A-201ENST00000250340 1419 ntAPPRIS P1 TSL 1 (best) BASIC38.11■■■■□ 3.69
PTPN23Q9H3S7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC38.1■■■■□ 3.69
PTPN23Q9H3S7 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC38.1■■■■□ 3.69
PTPN23Q9H3S7 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC38.1■■■■□ 3.69
PTPN23Q9H3S7 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC38.1■■■■□ 3.69
PTPN23Q9H3S7 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC38.09■■■■□ 3.69
PTPN23Q9H3S7 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC38.09■■■■□ 3.69
PTPN23Q9H3S7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC38.09■■■■□ 3.69
PTPN23Q9H3S7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC38.09■■■■□ 3.69
PTPN23Q9H3S7 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC38.08■■■■□ 3.69
PTPN23Q9H3S7 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC38.08■■■■□ 3.69
PTPN23Q9H3S7 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC38.07■■■■□ 3.69
PTPN23Q9H3S7 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC38.07■■■■□ 3.68
PTPN23Q9H3S7 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC38.06■■■■□ 3.68
PTPN23Q9H3S7 REST-210ENST00000638187 1334 ntTSL 5 BASIC38.06■■■■□ 3.68
PTPN23Q9H3S7 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC38.06■■■■□ 3.68
PTPN23Q9H3S7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC38.06■■■■□ 3.68
PTPN23Q9H3S7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC38.06■■■■□ 3.68
PTPN23Q9H3S7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC38.05■■■■□ 3.68
PTPN23Q9H3S7 GFER-205ENST00000569451 517 ntTSL 5 BASIC38.05■■■■□ 3.68
PTPN23Q9H3S7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
PTPN23Q9H3S7 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC38.05■■■■□ 3.68
PTPN23Q9H3S7 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC38.05■■■■□ 3.68
PTPN23Q9H3S7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
PTPN23Q9H3S7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC38.04■■■■□ 3.68
PTPN23Q9H3S7 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
PTPN23Q9H3S7 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC38.04■■■■□ 3.68
PTPN23Q9H3S7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC38.04■■■■□ 3.68
PTPN23Q9H3S7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC38.03■■■■□ 3.68
PTPN23Q9H3S7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC38.03■■■■□ 3.68
PTPN23Q9H3S7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC38.03■■■■□ 3.68
PTPN23Q9H3S7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
PTPN23Q9H3S7 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC38.02■■■■□ 3.68
PTPN23Q9H3S7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC38.02■■■■□ 3.68
PTPN23Q9H3S7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC38.01■■■■□ 3.68
PTPN23Q9H3S7 DRD5P2-201ENST00000421395 2012 ntBASIC38.01■■■■□ 3.68
PTPN23Q9H3S7 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC38.01■■■■□ 3.68
PTPN23Q9H3S7 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC38.01■■■■□ 3.67
PTPN23Q9H3S7 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC38.01■■■■□ 3.67
PTPN23Q9H3S7 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC38.01■■■■□ 3.67
PTPN23Q9H3S7 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC38■■■■□ 3.67
PTPN23Q9H3S7 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC38■■■■□ 3.67
PTPN23Q9H3S7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC37.99■■■■□ 3.67
PTPN23Q9H3S7 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC37.99■■■■□ 3.67
PTPN23Q9H3S7 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC37.99■■■■□ 3.67
PTPN23Q9H3S7 AC009831.1-201ENST00000580420 1582 ntBASIC37.99■■■■□ 3.67
PTPN23Q9H3S7 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC37.99■■■■□ 3.67
PTPN23Q9H3S7 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC37.98■■■■□ 3.67
PTPN23Q9H3S7 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC37.98■■■■□ 3.67
PTPN23Q9H3S7 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC37.97■■■■□ 3.67
PTPN23Q9H3S7 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC37.97■■■■□ 3.67
PTPN23Q9H3S7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC37.96■■■■□ 3.67
PTPN23Q9H3S7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC37.96■■■■□ 3.67
PTPN23Q9H3S7 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC37.95■■■■□ 3.67
PTPN23Q9H3S7 AL033527.3-201ENST00000566366 1196 ntBASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 WBP1-201ENST00000233615 1294 ntAPPRIS P2 TSL 1 (best) BASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC37.94■■■■□ 3.66
PTPN23Q9H3S7 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
PTPN23Q9H3S7 DEXI-202ENST00000469379 1393 ntAPPRIS P1 TSL 2 BASIC37.93■■■■□ 3.66
PTPN23Q9H3S7 AL592293.1-201ENST00000502889 1188 ntBASIC37.93■■■■□ 3.66
PTPN23Q9H3S7 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC37.93■■■■□ 3.66
PTPN23Q9H3S7 SMPD5-203ENST00000639008 1464 ntBASIC37.92■■■■□ 3.66
PTPN23Q9H3S7 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC37.91■■■■□ 3.66
PTPN23Q9H3S7 PSMG3-202ENST00000288607 1391 ntAPPRIS P1 TSL 1 (best) BASIC37.91■■■■□ 3.66
PTPN23Q9H3S7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC37.91■■■■□ 3.66
Retrieved 100 of 98,524 protein–RNA pairs in 1142 ms