Protein–RNA interactions for Protein: Q9H1E3

NUCKS1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, humanhuman

Known RBP Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUCKS1Q9H1E3 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC26.99■■□□□ 1.91
NUCKS1Q9H1E3 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.99■■□□□ 1.91
NUCKS1Q9H1E3 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.99■■□□□ 1.91
NUCKS1Q9H1E3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.99■■□□□ 1.91
NUCKS1Q9H1E3 VRK2-202ENST00000412104 1916 ntTSL 1 (best) BASIC26.98■■□□□ 1.91
NUCKS1Q9H1E3 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC26.98■■□□□ 1.91
NUCKS1Q9H1E3 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.98■■□□□ 1.91
NUCKS1Q9H1E3 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 MIR7108-201ENST00000614319 87 ntBASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC26.97■■□□□ 1.91
NUCKS1Q9H1E3 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.96■■□□□ 1.91
NUCKS1Q9H1E3 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
NUCKS1Q9H1E3 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.96■■□□□ 1.91
NUCKS1Q9H1E3 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC26.96■■□□□ 1.91
NUCKS1Q9H1E3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.91
NUCKS1Q9H1E3 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.95■■□□□ 1.9
NUCKS1Q9H1E3 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC26.95■■□□□ 1.9
NUCKS1Q9H1E3 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.94■■□□□ 1.9
NUCKS1Q9H1E3 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 AC091060.1-201ENST00000623524 1766 ntBASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
NUCKS1Q9H1E3 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC26.91■■□□□ 1.9
NUCKS1Q9H1E3 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC26.9■■□□□ 1.9
NUCKS1Q9H1E3 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.9■■□□□ 1.9
NUCKS1Q9H1E3 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC26.9■■□□□ 1.9
NUCKS1Q9H1E3 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NUCKS1Q9H1E3 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC26.89■■□□□ 1.9
NUCKS1Q9H1E3 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC26.89■■□□□ 1.9
NUCKS1Q9H1E3 AC110285.7-201ENST00000624417 1536 ntBASIC26.89■■□□□ 1.89
NUCKS1Q9H1E3 AL449106.1-201ENST00000608517 1980 ntBASIC26.88■■□□□ 1.89
NUCKS1Q9H1E3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.88■■□□□ 1.89
NUCKS1Q9H1E3 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NUCKS1Q9H1E3 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NUCKS1Q9H1E3 PVT1-219ENST00000523427 938 ntTSL 3 BASIC26.87■■□□□ 1.89
NUCKS1Q9H1E3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC26.87■■□□□ 1.89
NUCKS1Q9H1E3 ALG2-203ENST00000476832 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.87■■□□□ 1.89
NUCKS1Q9H1E3 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
NUCKS1Q9H1E3 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC26.86■■□□□ 1.89
NUCKS1Q9H1E3 CDC16-211ENST00000628084 2058 ntTSL 5 BASIC26.86■■□□□ 1.89
NUCKS1Q9H1E3 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC26.86■■□□□ 1.89
NUCKS1Q9H1E3 AC145676.1-201ENST00000514988 2004 ntBASIC26.85■■□□□ 1.89
NUCKS1Q9H1E3 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NUCKS1Q9H1E3 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NUCKS1Q9H1E3 CNNM2-201ENST00000369875 2059 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
NUCKS1Q9H1E3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC26.84■■□□□ 1.89
NUCKS1Q9H1E3 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.84■■□□□ 1.89
NUCKS1Q9H1E3 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NUCKS1Q9H1E3 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
NUCKS1Q9H1E3 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC26.83■■□□□ 1.89
NUCKS1Q9H1E3 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC26.83■■□□□ 1.89
NUCKS1Q9H1E3 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC26.83■■□□□ 1.89
NUCKS1Q9H1E3 LINC00588-201ENST00000521663 1875 ntTSL 2 BASIC26.83■■□□□ 1.88
NUCKS1Q9H1E3 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.82■■□□□ 1.88
NUCKS1Q9H1E3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC26.82■■□□□ 1.88
NUCKS1Q9H1E3 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
NUCKS1Q9H1E3 AP004609.3-201ENST00000610705 1884 ntBASIC26.81■■□□□ 1.88
NUCKS1Q9H1E3 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC26.81■■□□□ 1.88
NUCKS1Q9H1E3 PPM1B-202ENST00000345249 1713 ntTSL 1 (best) BASIC26.81■■□□□ 1.88
NUCKS1Q9H1E3 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC26.8■■□□□ 1.88
NUCKS1Q9H1E3 LINC01971-201ENST00000617888 1048 ntBASIC26.8■■□□□ 1.88
NUCKS1Q9H1E3 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC26.8■■□□□ 1.88
NUCKS1Q9H1E3 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC26.8■■□□□ 1.88
NUCKS1Q9H1E3 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC26.8■■□□□ 1.88
NUCKS1Q9H1E3 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC26.79■■□□□ 1.88
NUCKS1Q9H1E3 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NUCKS1Q9H1E3 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC26.79■■□□□ 1.88
NUCKS1Q9H1E3 BTBD6-204ENST00000463376 2195 ntAPPRIS ALT2 TSL 2 BASIC26.78■■□□□ 1.88
NUCKS1Q9H1E3 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.78■■□□□ 1.88
NUCKS1Q9H1E3 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.78■■□□□ 1.88
NUCKS1Q9H1E3 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC26.77■■□□□ 1.88
NUCKS1Q9H1E3 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC26.76■■□□□ 1.87
NUCKS1Q9H1E3 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC26.76■■□□□ 1.87
NUCKS1Q9H1E3 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 CRTAP-202ENST00000449224 1811 ntAPPRIS ALT2 TSL 2 BASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 DUX4L11-201ENST00000611504 1267 ntBASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 DUX4L12-201ENST00000614593 1267 ntBASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 DUX4L14-201ENST00000621227 1267 ntBASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC26.75■■□□□ 1.87
NUCKS1Q9H1E3 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC26.74■■□□□ 1.87
NUCKS1Q9H1E3 AC142472.1-201ENST00000612013 1741 ntBASIC26.73■■□□□ 1.87
NUCKS1Q9H1E3 WHAMMP3-201ENST00000611636 1609 ntBASIC26.73■■□□□ 1.87
NUCKS1Q9H1E3 UBE2J2-202ENST00000349431 1733 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NUCKS1Q9H1E3 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
NUCKS1Q9H1E3 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC26.72■■□□□ 1.87
NUCKS1Q9H1E3 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.72■■□□□ 1.87
NUCKS1Q9H1E3 RNF166-209ENST00000567844 633 ntTSL 5 BASIC26.72■■□□□ 1.87
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms