Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Cthrc1Q9D1D6 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 Mgrn1-202ENSMUST00000070658 3290 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
Cthrc1Q9D1D6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
Cthrc1Q9D1D6 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Cthrc1Q9D1D6 Gm9812-201ENSMUST00000061934 968 ntBASIC21.21■□□□□ 0.99
Cthrc1Q9D1D6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
Cthrc1Q9D1D6 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Gm12818-201ENSMUST00000117562 1349 ntBASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.2■□□□□ 0.98
Cthrc1Q9D1D6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Cthrc1Q9D1D6 Gm45364-201ENSMUST00000210883 159 ntBASIC21.19■□□□□ 0.98
Cthrc1Q9D1D6 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Cthrc1Q9D1D6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Cthrc1Q9D1D6 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.17■□□□□ 0.98
Cthrc1Q9D1D6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Cthrc1Q9D1D6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Cthrc1Q9D1D6 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cthrc1Q9D1D6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.15■□□□□ 0.98
Cthrc1Q9D1D6 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cthrc1Q9D1D6 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cthrc1Q9D1D6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Cthrc1Q9D1D6 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC21.14■□□□□ 0.98
Cthrc1Q9D1D6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
Cthrc1Q9D1D6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cthrc1Q9D1D6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Cthrc1Q9D1D6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.14■□□□□ 0.97
Cthrc1Q9D1D6 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Cthrc1Q9D1D6 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Cthrc1Q9D1D6 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Cthrc1Q9D1D6 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cthrc1Q9D1D6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Cthrc1Q9D1D6 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cthrc1Q9D1D6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cthrc1Q9D1D6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Cthrc1Q9D1D6 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cthrc1Q9D1D6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cthrc1Q9D1D6 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Cthrc1Q9D1D6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
Cthrc1Q9D1D6 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.09■□□□□ 0.97
Cthrc1Q9D1D6 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cthrc1Q9D1D6 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Cthrc1Q9D1D6 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cthrc1Q9D1D6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Cthrc1Q9D1D6 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
Cthrc1Q9D1D6 AC153911.1-201ENSMUST00000220378 758 ntBASIC21.08■□□□□ 0.97
Cthrc1Q9D1D6 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Cthrc1Q9D1D6 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
Cthrc1Q9D1D6 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cthrc1Q9D1D6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cthrc1Q9D1D6 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Cthrc1Q9D1D6 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Cthrc1Q9D1D6 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Cthrc1Q9D1D6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Cthrc1Q9D1D6 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC21.04■□□□□ 0.96
Cthrc1Q9D1D6 Cap2-205ENSMUST00000225824 1634 ntBASIC21.04■□□□□ 0.96
Cthrc1Q9D1D6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
Cthrc1Q9D1D6 Gm42699-201ENSMUST00000198104 1657 ntBASIC21.03■□□□□ 0.96
Cthrc1Q9D1D6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cthrc1Q9D1D6 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cthrc1Q9D1D6 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Cthrc1Q9D1D6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Cthrc1Q9D1D6 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
Cthrc1Q9D1D6 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC21.02■□□□□ 0.96
Cthrc1Q9D1D6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
Cthrc1Q9D1D6 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.01■□□□□ 0.95
Cthrc1Q9D1D6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
Cthrc1Q9D1D6 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC21■□□□□ 0.95
Cthrc1Q9D1D6 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21■□□□□ 0.95
Cthrc1Q9D1D6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
Cthrc1Q9D1D6 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Scarna2-201ENSMUST00000157560 414 ntBASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Terc-201ENSMUST00000082862 423 ntBASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Cthrc1Q9D1D6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cthrc1Q9D1D6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms