Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC30.88■■■□□ 2.53
RTFDC1Q9BY42 AL359258.2-201ENST00000564063 1566 ntBASIC30.88■■■□□ 2.53
RTFDC1Q9BY42 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
RTFDC1Q9BY42 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC30.87■■■□□ 2.53
RTFDC1Q9BY42 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC30.86■■■□□ 2.53
RTFDC1Q9BY42 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
RTFDC1Q9BY42 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
RTFDC1Q9BY42 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC30.84■■■□□ 2.53
RTFDC1Q9BY42 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 AC100797.4-201ENST00000631653 1827 ntBASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 HSPB6-202ENST00000587965 711 ntTSL 2 BASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 AL035685.1-201ENST00000636663 812 ntBASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
RTFDC1Q9BY42 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC30.82■■■□□ 2.52
RTFDC1Q9BY42 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC30.82■■■□□ 2.52
RTFDC1Q9BY42 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC30.82■■■□□ 2.52
RTFDC1Q9BY42 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC30.82■■■□□ 2.52
RTFDC1Q9BY42 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC30.82■■■□□ 2.52
RTFDC1Q9BY42 AL451085.2-201ENST00000605085 799 ntBASIC30.81■■■□□ 2.52
RTFDC1Q9BY42 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC30.81■■■□□ 2.52
RTFDC1Q9BY42 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC30.81■■■□□ 2.52
RTFDC1Q9BY42 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
RTFDC1Q9BY42 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC30.81■■■□□ 2.52
RTFDC1Q9BY42 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC30.8■■■□□ 2.52
RTFDC1Q9BY42 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTFDC1Q9BY42 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC30.8■■■□□ 2.52
RTFDC1Q9BY42 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC30.79■■■□□ 2.52
RTFDC1Q9BY42 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC30.79■■■□□ 2.52
RTFDC1Q9BY42 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC30.79■■■□□ 2.52
RTFDC1Q9BY42 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 DUX4L9-201ENST00000449051 1259 ntBASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 RAP2CP1-202ENST00000605179 643 ntBASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC30.78■■■□□ 2.52
RTFDC1Q9BY42 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 RP9P-202ENST00000450133 1212 ntBASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC30.77■■■□□ 2.52
RTFDC1Q9BY42 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC30.76■■■□□ 2.51
RTFDC1Q9BY42 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC30.76■■■□□ 2.51
RTFDC1Q9BY42 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC30.75■■■□□ 2.51
RTFDC1Q9BY42 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RTFDC1Q9BY42 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RTFDC1Q9BY42 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RTFDC1Q9BY42 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
RTFDC1Q9BY42 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC30.74■■■□□ 2.51
RTFDC1Q9BY42 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RTFDC1Q9BY42 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
RTFDC1Q9BY42 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC30.72■■■□□ 2.51
RTFDC1Q9BY42 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC30.72■■■□□ 2.51
RTFDC1Q9BY42 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC30.72■■■□□ 2.51
RTFDC1Q9BY42 AC093536.1-201ENST00000569153 554 ntBASIC30.72■■■□□ 2.51
RTFDC1Q9BY42 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC30.72■■■□□ 2.51
RTFDC1Q9BY42 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
RTFDC1Q9BY42 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC30.71■■■□□ 2.51
RTFDC1Q9BY42 SPCS2P3-201ENST00000500401 656 ntBASIC30.71■■■□□ 2.51
RTFDC1Q9BY42 TRIR-205ENST00000592273 783 ntTSL 3 BASIC30.71■■■□□ 2.51
RTFDC1Q9BY42 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC30.71■■■□□ 2.51
RTFDC1Q9BY42 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC30.7■■■□□ 2.51
RTFDC1Q9BY42 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
RTFDC1Q9BY42 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC30.7■■■□□ 2.51
RTFDC1Q9BY42 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.5
RTFDC1Q9BY42 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.69■■■□□ 2.5
RTFDC1Q9BY42 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC30.69■■■□□ 2.5
RTFDC1Q9BY42 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RTFDC1Q9BY42 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC30.68■■■□□ 2.5
RTFDC1Q9BY42 AC074183.2-201ENST00000623112 922 ntBASIC30.68■■■□□ 2.5
RTFDC1Q9BY42 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
RTFDC1Q9BY42 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC30.67■■■□□ 2.5
RTFDC1Q9BY42 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RTFDC1Q9BY42 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC30.67■■■□□ 2.5
RTFDC1Q9BY42 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
RTFDC1Q9BY42 PFN2-211ENST00000489155 636 ntTSL 4 BASIC30.66■■■□□ 2.5
RTFDC1Q9BY42 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC30.66■■■□□ 2.5
RTFDC1Q9BY42 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC30.66■■■□□ 2.5
RTFDC1Q9BY42 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC30.65■■■□□ 2.5
RTFDC1Q9BY42 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC30.65■■■□□ 2.5
RTFDC1Q9BY42 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.65■■■□□ 2.5
RTFDC1Q9BY42 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC30.65■■■□□ 2.5
RTFDC1Q9BY42 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC30.64■■■□□ 2.5
RTFDC1Q9BY42 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC30.64■■■□□ 2.5
RTFDC1Q9BY42 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC30.64■■■□□ 2.5
RTFDC1Q9BY42 AC010980.1-201ENST00000587192 1142 ntBASIC30.64■■■□□ 2.5
RTFDC1Q9BY42 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC30.63■■■□□ 2.49
RTFDC1Q9BY42 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTFDC1Q9BY42 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.63■■■□□ 2.49
RTFDC1Q9BY42 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
RTFDC1Q9BY42 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC30.62■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms