Protein–RNA interactions for Protein: Q99NB8

Ubqln4, Ubiquilin-4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubqln4Q99NB8 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Ubqln4Q99NB8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
Ubqln4Q99NB8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Ubqln4Q99NB8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
Ubqln4Q99NB8 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.59■□□□□ 0.89
Ubqln4Q99NB8 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubqln4Q99NB8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubqln4Q99NB8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Ubqln4Q99NB8 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC20.58■□□□□ 0.89
Ubqln4Q99NB8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.58■□□□□ 0.89
Ubqln4Q99NB8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
Ubqln4Q99NB8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
Ubqln4Q99NB8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
Ubqln4Q99NB8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC20.57■□□□□ 0.88
Ubqln4Q99NB8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln4Q99NB8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
Ubqln4Q99NB8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Gm9812-201ENSMUST00000061934 968 ntBASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
Ubqln4Q99NB8 Gm42699-201ENSMUST00000198104 1657 ntBASIC20.54■□□□□ 0.88
Ubqln4Q99NB8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC20.54■□□□□ 0.88
Ubqln4Q99NB8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln4Q99NB8 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
Ubqln4Q99NB8 Gm12818-201ENSMUST00000117562 1349 ntBASIC20.53■□□□□ 0.88
Ubqln4Q99NB8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln4Q99NB8 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln4Q99NB8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
Ubqln4Q99NB8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.53■□□□□ 0.88
Ubqln4Q99NB8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
Ubqln4Q99NB8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
Ubqln4Q99NB8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubqln4Q99NB8 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Ubqln4Q99NB8 Kcnk2-205ENSMUST00000192723 1642 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubqln4Q99NB8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
Ubqln4Q99NB8 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC20.5■□□□□ 0.87
Ubqln4Q99NB8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.49■□□□□ 0.87
Ubqln4Q99NB8 AC153911.1-201ENSMUST00000220378 758 ntBASIC20.49■□□□□ 0.87
Ubqln4Q99NB8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln4Q99NB8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
Ubqln4Q99NB8 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Ubqln4Q99NB8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubqln4Q99NB8 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Ubqln4Q99NB8 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln4Q99NB8 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln4Q99NB8 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Ubqln4Q99NB8 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Cadps-203ENSMUST00000112658 5458 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Ubqln4Q99NB8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
Ubqln4Q99NB8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubqln4Q99NB8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC20.44■□□□□ 0.86
Ubqln4Q99NB8 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC20.43■□□□□ 0.86
Ubqln4Q99NB8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
Ubqln4Q99NB8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC20.42■□□□□ 0.86
Ubqln4Q99NB8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
Ubqln4Q99NB8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 2410022M11Rik-201ENSMUST00000186474 1911 ntBASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Ubqln4Q99NB8 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms