Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AL157400.5-201ENST00000507624 621 ntBASIC20.32■□□□□ 0.84
ZNF48Q96MX3 AC126177.7-201ENST00000547904 679 ntBASIC20.32■□□□□ 0.84
ZNF48Q96MX3 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.32■□□□□ 0.84
ZNF48Q96MX3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
ZNF48Q96MX3 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF48Q96MX3 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
ZNF48Q96MX3 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF48Q96MX3 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF48Q96MX3 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
ZNF48Q96MX3 KRT18P60-201ENST00000312876 1297 ntBASIC20.29■□□□□ 0.84
ZNF48Q96MX3 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC20.29■□□□□ 0.84
ZNF48Q96MX3 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC20.29■□□□□ 0.84
ZNF48Q96MX3 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC20.28■□□□□ 0.84
ZNF48Q96MX3 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF48Q96MX3 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
ZNF48Q96MX3 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
ZNF48Q96MX3 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF48Q96MX3 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF48Q96MX3 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
ZNF48Q96MX3 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC20.27■□□□□ 0.84
ZNF48Q96MX3 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
ZNF48Q96MX3 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF48Q96MX3 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
ZNF48Q96MX3 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF48Q96MX3 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF48Q96MX3 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
ZNF48Q96MX3 AC142086.6-201ENST00000621154 1765 ntBASIC20.26■□□□□ 0.83
ZNF48Q96MX3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.25■□□□□ 0.83
ZNF48Q96MX3 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC20.25■□□□□ 0.83
ZNF48Q96MX3 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
ZNF48Q96MX3 AC004987.1-201ENST00000428627 508 ntBASIC20.25■□□□□ 0.83
ZNF48Q96MX3 GFER-205ENST00000569451 517 ntTSL 5 BASIC20.25■□□□□ 0.83
ZNF48Q96MX3 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF48Q96MX3 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
ZNF48Q96MX3 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC20.24■□□□□ 0.83
ZNF48Q96MX3 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF48Q96MX3 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
ZNF48Q96MX3 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
ZNF48Q96MX3 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF48Q96MX3 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.23■□□□□ 0.83
ZNF48Q96MX3 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
ZNF48Q96MX3 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.22■□□□□ 0.83
ZNF48Q96MX3 TSPY13P-201ENST00000338964 914 ntBASIC20.22■□□□□ 0.83
ZNF48Q96MX3 ATP5G2P3-201ENST00000429083 425 ntBASIC20.22■□□□□ 0.83
ZNF48Q96MX3 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.22■□□□□ 0.83
ZNF48Q96MX3 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF48Q96MX3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
ZNF48Q96MX3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
ZNF48Q96MX3 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.21■□□□□ 0.83
ZNF48Q96MX3 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ZNF48Q96MX3 MYCL-202ENST00000372816 1688 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 AC007029.1-201ENST00000604183 313 ntBASIC20.2■□□□□ 0.82
ZNF48Q96MX3 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ZNF48Q96MX3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 AL359258.2-201ENST00000564063 1566 ntBASIC20.19■□□□□ 0.82
ZNF48Q96MX3 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.19■□□□□ 0.82
ZNF48Q96MX3 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF48Q96MX3 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF48Q96MX3 GUK1-208ENST00000366728 842 ntTSL 2 BASIC20.18■□□□□ 0.82
ZNF48Q96MX3 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC20.18■□□□□ 0.82
ZNF48Q96MX3 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ZNF48Q96MX3 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC20.17■□□□□ 0.82
ZNF48Q96MX3 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF48Q96MX3 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC20.17■□□□□ 0.82
ZNF48Q96MX3 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
ZNF48Q96MX3 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC20.16■□□□□ 0.82
ZNF48Q96MX3 REST-210ENST00000638187 1334 ntTSL 5 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms