Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.49■■□□□ 1.03
SPG11Q96JI7 BEX3-202ENST00000372634 753 ntTSL 2 BASIC21.49■■□□□ 1.03
SPG11Q96JI7 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPG11Q96JI7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC21.49■■□□□ 1.03
SPG11Q96JI7 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC21.49■■□□□ 1.03
SPG11Q96JI7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPG11Q96JI7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPG11Q96JI7 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SPG11Q96JI7 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPG11Q96JI7 THA1P-201ENST00000590384 1145 ntBASIC21.48■■□□□ 1.03
SPG11Q96JI7 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC21.48■■□□□ 1.03
SPG11Q96JI7 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
SPG11Q96JI7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SPG11Q96JI7 AL135925.1-201ENST00000605920 1701 ntBASIC21.48■■□□□ 1.03
SPG11Q96JI7 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SPG11Q96JI7 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC21.48■■□□□ 1.03
SPG11Q96JI7 AC074183.2-201ENST00000623112 922 ntBASIC21.48■■□□□ 1.03
SPG11Q96JI7 AL359258.2-201ENST00000564063 1566 ntBASIC21.48■■□□□ 1.03
SPG11Q96JI7 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.47■■□□□ 1.03
SPG11Q96JI7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPG11Q96JI7 AC026202.3-201ENST00000600805 1127 ntBASIC21.47■■□□□ 1.03
SPG11Q96JI7 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SPG11Q96JI7 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SPG11Q96JI7 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC21.46■■□□□ 1.03
SPG11Q96JI7 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.46■■□□□ 1.03
SPG11Q96JI7 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SPG11Q96JI7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPG11Q96JI7 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPG11Q96JI7 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC21.45■■□□□ 1.02
SPG11Q96JI7 ABHD17B-202ENST00000377041 1312 ntAPPRIS P4 TSL 1 (best) BASIC21.45■■□□□ 1.02
SPG11Q96JI7 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SPG11Q96JI7 AL356441.2-201ENST00000443009 864 ntBASIC21.45■■□□□ 1.02
SPG11Q96JI7 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC21.45■■□□□ 1.02
SPG11Q96JI7 BHLHE23-202ENST00000612929 1109 ntBASIC21.45■■□□□ 1.02
SPG11Q96JI7 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC21.44■■□□□ 1.02
SPG11Q96JI7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPG11Q96JI7 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SPG11Q96JI7 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
SPG11Q96JI7 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SPG11Q96JI7 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC21.43■■□□□ 1.02
SPG11Q96JI7 OR2A1-AS1-204ENST00000470435 602 ntBASIC21.43■■□□□ 1.02
SPG11Q96JI7 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC21.43■■□□□ 1.02
SPG11Q96JI7 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC21.43■■□□□ 1.02
SPG11Q96JI7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.43■■□□□ 1.02
SPG11Q96JI7 AC139795.1-202ENST00000500444 432 ntBASIC21.43■■□□□ 1.02
SPG11Q96JI7 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPG11Q96JI7 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPG11Q96JI7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SPG11Q96JI7 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SPG11Q96JI7 AC103834.1-201ENST00000520383 144 ntBASIC21.42■■□□□ 1.02
SPG11Q96JI7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC21.41■■□□□ 1.02
SPG11Q96JI7 SPCS2P3-201ENST00000500401 656 ntBASIC21.41■■□□□ 1.02
SPG11Q96JI7 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPG11Q96JI7 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPG11Q96JI7 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SPG11Q96JI7 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SPG11Q96JI7 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC21.41■■□□□ 1.02
SPG11Q96JI7 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPG11Q96JI7 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPG11Q96JI7 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC21.4■■□□□ 1.02
SPG11Q96JI7 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
SPG11Q96JI7 PVT1_1.1-201ENST00000615125 194 ntBASIC21.4■■□□□ 1.02
SPG11Q96JI7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
SPG11Q96JI7 YBX1P4-201ENST00000392794 808 ntBASIC21.39■■□□□ 1.02
SPG11Q96JI7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPG11Q96JI7 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
SPG11Q96JI7 AC103724.3-201ENST00000564481 992 ntBASIC21.39■■□□□ 1.01
SPG11Q96JI7 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.39■■□□□ 1.01
SPG11Q96JI7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
SPG11Q96JI7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.38■■□□□ 1.01
SPG11Q96JI7 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPG11Q96JI7 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC21.38■■□□□ 1.01
SPG11Q96JI7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC21.38■■□□□ 1.01
SPG11Q96JI7 HYI-210ENST00000486909 905 ntTSL 5 BASIC21.38■■□□□ 1.01
SPG11Q96JI7 MIR4508-201ENST00000584178 70 ntBASIC21.38■■□□□ 1.01
SPG11Q96JI7 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
SPG11Q96JI7 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
SPG11Q96JI7 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC21.37■■□□□ 1.01
SPG11Q96JI7 PSMG4-206ENST00000438998 838 ntAPPRIS P1 TSL 2 BASIC21.37■■□□□ 1.01
SPG11Q96JI7 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC21.37■■□□□ 1.01
SPG11Q96JI7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
SPG11Q96JI7 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC21.37■■□□□ 1.01
SPG11Q96JI7 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPG11Q96JI7 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC21.36■■□□□ 1.01
SPG11Q96JI7 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC21.36■■□□□ 1.01
SPG11Q96JI7 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
SPG11Q96JI7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
SPG11Q96JI7 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
SPG11Q96JI7 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC21.36■■□□□ 1.01
SPG11Q96JI7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPG11Q96JI7 NTHL1-201ENST00000219066 1067 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
SPG11Q96JI7 MIR6765-201ENST00000614092 87 ntBASIC21.35■■□□□ 1.01
SPG11Q96JI7 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPG11Q96JI7 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPG11Q96JI7 RFLNA-202ENST00000338359 652 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPG11Q96JI7 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC21.34■■□□□ 1.01
SPG11Q96JI7 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC21.34■■□□□ 1.01
SPG11Q96JI7 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
SPG11Q96JI7 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC21.34■■□□□ 1.01
SPG11Q96JI7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 15.4 ms