Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC32.32■■■□□ 2.76
ZNF428Q96B54 AC148477.6-201ENST00000623746 465 ntBASIC32.32■■■□□ 2.76
ZNF428Q96B54 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
ZNF428Q96B54 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC32.31■■■□□ 2.76
ZNF428Q96B54 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.31■■■□□ 2.76
ZNF428Q96B54 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC32.31■■■□□ 2.76
ZNF428Q96B54 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC32.29■■■□□ 2.76
ZNF428Q96B54 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC32.28■■■□□ 2.76
ZNF428Q96B54 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC32.28■■■□□ 2.76
ZNF428Q96B54 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC32.28■■■□□ 2.76
ZNF428Q96B54 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
ZNF428Q96B54 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC32.27■■■□□ 2.76
ZNF428Q96B54 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
ZNF428Q96B54 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.26■■■□□ 2.76
ZNF428Q96B54 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.26■■■□□ 2.75
ZNF428Q96B54 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC32.26■■■□□ 2.75
ZNF428Q96B54 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC32.26■■■□□ 2.75
ZNF428Q96B54 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC32.26■■■□□ 2.75
ZNF428Q96B54 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC32.25■■■□□ 2.75
ZNF428Q96B54 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32.25■■■□□ 2.75
ZNF428Q96B54 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ZNF428Q96B54 RARRES2P2-201ENST00000394842 485 ntBASIC32.24■■■□□ 2.75
ZNF428Q96B54 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC32.24■■■□□ 2.75
ZNF428Q96B54 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC32.24■■■□□ 2.75
ZNF428Q96B54 ZNF775-201ENST00000329630 2257 ntAPPRIS P1 TSL 1 (best) BASIC32.24■■■□□ 2.75
ZNF428Q96B54 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC32.23■■■□□ 2.75
ZNF428Q96B54 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC32.23■■■□□ 2.75
ZNF428Q96B54 AC022413.1-201ENST00000624602 984 ntBASIC32.22■■■□□ 2.75
ZNF428Q96B54 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC32.22■■■□□ 2.75
ZNF428Q96B54 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC32.21■■■□□ 2.75
ZNF428Q96B54 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 CHST11-203ENST00000547956 936 ntTSL 2 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC32.21■■■□□ 2.75
ZNF428Q96B54 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC32.21■■■□□ 2.75
ZNF428Q96B54 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC32.2■■■□□ 2.75
ZNF428Q96B54 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC32.2■■■□□ 2.75
ZNF428Q96B54 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.75
ZNF428Q96B54 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC32.2■■■□□ 2.74
ZNF428Q96B54 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC32.19■■■□□ 2.74
ZNF428Q96B54 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.19■■■□□ 2.74
ZNF428Q96B54 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC32.18■■■□□ 2.74
ZNF428Q96B54 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC32.18■■■□□ 2.74
ZNF428Q96B54 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC32.18■■■□□ 2.74
ZNF428Q96B54 MIR219A2-201ENST00000608502 1504 ntBASIC32.17■■■□□ 2.74
ZNF428Q96B54 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC32.16■■■□□ 2.74
ZNF428Q96B54 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC32.16■■■□□ 2.74
ZNF428Q96B54 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC32.16■■■□□ 2.74
ZNF428Q96B54 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC32.16■■■□□ 2.74
ZNF428Q96B54 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
ZNF428Q96B54 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC32.15■■■□□ 2.74
ZNF428Q96B54 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC32.15■■■□□ 2.74
ZNF428Q96B54 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC32.15■■■□□ 2.74
ZNF428Q96B54 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.14■■■□□ 2.74
ZNF428Q96B54 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC32.14■■■□□ 2.74
ZNF428Q96B54 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC32.13■■■□□ 2.73
ZNF428Q96B54 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC32.13■■■□□ 2.73
ZNF428Q96B54 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
ZNF428Q96B54 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC32.12■■■□□ 2.73
ZNF428Q96B54 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
ZNF428Q96B54 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC32.12■■■□□ 2.73
ZNF428Q96B54 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZNF428Q96B54 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
ZNF428Q96B54 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC32.12■■■□□ 2.73
ZNF428Q96B54 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZNF428Q96B54 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC32.12■■■□□ 2.73
ZNF428Q96B54 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC32.11■■■□□ 2.73
ZNF428Q96B54 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.1■■■□□ 2.73
ZNF428Q96B54 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC32.1■■■□□ 2.73
ZNF428Q96B54 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ZNF428Q96B54 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC32.1■■■□□ 2.73
ZNF428Q96B54 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC32.1■■■□□ 2.73
ZNF428Q96B54 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ZNF428Q96B54 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC32.09■■■□□ 2.73
ZNF428Q96B54 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC32.09■■■□□ 2.73
ZNF428Q96B54 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ZNF428Q96B54 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ZNF428Q96B54 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC32.09■■■□□ 2.73
ZNF428Q96B54 RNF126P1-201ENST00000567452 1320 ntBASIC32.08■■■□□ 2.73
ZNF428Q96B54 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC32.08■■■□□ 2.73
ZNF428Q96B54 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC32.08■■■□□ 2.73
ZNF428Q96B54 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC32.08■■■□□ 2.73
ZNF428Q96B54 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC32.07■■■□□ 2.73
ZNF428Q96B54 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ZNF428Q96B54 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ZNF428Q96B54 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.07■■■□□ 2.72
ZNF428Q96B54 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ZNF428Q96B54 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.07■■■□□ 2.72
ZNF428Q96B54 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC32.07■■■□□ 2.72
ZNF428Q96B54 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
ZNF428Q96B54 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
ZNF428Q96B54 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC32.06■■■□□ 2.72
ZNF428Q96B54 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC32.06■■■□□ 2.72
ZNF428Q96B54 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC32.06■■■□□ 2.72
ZNF428Q96B54 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
ZNF428Q96B54 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC32.04■■■□□ 2.72
ZNF428Q96B54 WHAMMP3-201ENST00000611636 1609 ntBASIC32.04■■■□□ 2.72
ZNF428Q96B54 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC32.03■■■□□ 2.72
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms