Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.39■■□□□ 1.17
HPS1Q92902 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
HPS1Q92902 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
HPS1Q92902 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.39■■□□□ 1.17
HPS1Q92902 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC22.38■■□□□ 1.17
HPS1Q92902 GCLC-209ENST00000514004 2356 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC22.38■■□□□ 1.17
HPS1Q92902 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.38■■□□□ 1.17
HPS1Q92902 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 SHISA5-201ENST00000296444 2369 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
HPS1Q92902 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HPS1Q92902 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.37■■□□□ 1.17
HPS1Q92902 DUX4L29-201ENST00000425409 679 ntBASIC22.37■■□□□ 1.17
HPS1Q92902 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
HPS1Q92902 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC22.37■■□□□ 1.17
HPS1Q92902 ARRDC2-202ENST00000379656 2528 ntTSL 2 BASIC22.37■■□□□ 1.17
HPS1Q92902 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.36■■□□□ 1.17
HPS1Q92902 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
HPS1Q92902 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HPS1Q92902 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC22.36■■□□□ 1.17
HPS1Q92902 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
HPS1Q92902 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
HPS1Q92902 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HPS1Q92902 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.35■■□□□ 1.17
HPS1Q92902 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
HPS1Q92902 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.35■■□□□ 1.17
HPS1Q92902 HLA-V-202ENST00000446817 847 ntBASIC22.35■■□□□ 1.17
HPS1Q92902 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
HPS1Q92902 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC22.35■■□□□ 1.17
HPS1Q92902 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC22.34■■□□□ 1.17
HPS1Q92902 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
HPS1Q92902 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
HPS1Q92902 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.33■■□□□ 1.17
HPS1Q92902 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.33■■□□□ 1.17
HPS1Q92902 BX255925.1-201ENST00000566954 1854 ntBASIC22.33■■□□□ 1.17
HPS1Q92902 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC22.33■■□□□ 1.17
HPS1Q92902 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
HPS1Q92902 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
HPS1Q92902 AC091060.1-201ENST00000623524 1766 ntBASIC22.33■■□□□ 1.16
HPS1Q92902 GDF1-201ENST00000247005 2517 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HPS1Q92902 CERS1-204ENST00000623882 2517 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS1Q92902 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC22.32■■□□□ 1.16
HPS1Q92902 EBF4-210ENST00000609451 2012 ntAPPRIS ALT1 TSL 5 BASIC22.32■■□□□ 1.16
HPS1Q92902 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS1Q92902 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
HPS1Q92902 AC108673.1-201ENST00000510422 1159 ntBASIC22.32■■□□□ 1.16
HPS1Q92902 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
HPS1Q92902 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.31■■□□□ 1.16
HPS1Q92902 MBP-237ENST00000579129 1052 ntTSL 5 BASIC22.31■■□□□ 1.16
HPS1Q92902 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
HPS1Q92902 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS1Q92902 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
HPS1Q92902 AL135925.1-201ENST00000605920 1701 ntBASIC22.31■■□□□ 1.16
HPS1Q92902 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.31■■□□□ 1.16
HPS1Q92902 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HPS1Q92902 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
HPS1Q92902 AC133561.1-201ENST00000568600 2415 ntBASIC22.3■■□□□ 1.16
HPS1Q92902 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
HPS1Q92902 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.3■■□□□ 1.16
HPS1Q92902 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
HPS1Q92902 PMS1-205ENST00000409985 1882 ntTSL 2 BASIC22.29■■□□□ 1.16
HPS1Q92902 CIB2-204ENST00000557846 934 ntTSL 3 BASIC22.29■■□□□ 1.16
HPS1Q92902 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC22.28■■□□□ 1.16
HPS1Q92902 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
HPS1Q92902 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
HPS1Q92902 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
HPS1Q92902 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
HPS1Q92902 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC22.27■■□□□ 1.16
HPS1Q92902 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HPS1Q92902 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
HPS1Q92902 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC22.26■■□□□ 1.15
HPS1Q92902 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
HPS1Q92902 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC22.26■■□□□ 1.15
HPS1Q92902 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
HPS1Q92902 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC22.25■■□□□ 1.15
HPS1Q92902 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC22.25■■□□□ 1.15
HPS1Q92902 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC22.24■■□□□ 1.15
HPS1Q92902 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC22.24■■□□□ 1.15
HPS1Q92902 AC021231.2-201ENST00000594613 730 ntBASIC22.24■■□□□ 1.15
HPS1Q92902 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC22.24■■□□□ 1.15
HPS1Q92902 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
HPS1Q92902 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
HPS1Q92902 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
HPS1Q92902 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HPS1Q92902 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HPS1Q92902 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
HPS1Q92902 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
HPS1Q92902 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
HPS1Q92902 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
HPS1Q92902 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
HPS1Q92902 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HPS1Q92902 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
HPS1Q92902 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
HPS1Q92902 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.22■■□□□ 1.15
HPS1Q92902 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms