Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC28.65■■■□□ 2.18
USP6NLQ92738 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC28.65■■■□□ 2.18
USP6NLQ92738 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC28.65■■■□□ 2.18
USP6NLQ92738 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC28.65■■■□□ 2.18
USP6NLQ92738 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP6NLQ92738 SDF2L1-201ENST00000248958 865 ntAPPRIS P1 TSL 1 (best) BASIC28.64■■■□□ 2.18
USP6NLQ92738 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC28.64■■■□□ 2.18
USP6NLQ92738 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC28.64■■■□□ 2.18
USP6NLQ92738 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC28.63■■■□□ 2.17
USP6NLQ92738 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC28.63■■■□□ 2.17
USP6NLQ92738 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC28.63■■■□□ 2.17
USP6NLQ92738 DUX4L9-201ENST00000449051 1259 ntBASIC28.63■■■□□ 2.17
USP6NLQ92738 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC28.63■■■□□ 2.17
USP6NLQ92738 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.62■■■□□ 2.17
USP6NLQ92738 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC28.62■■■□□ 2.17
USP6NLQ92738 AC100797.4-201ENST00000631653 1827 ntBASIC28.62■■■□□ 2.17
USP6NLQ92738 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USP6NLQ92738 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC28.62■■■□□ 2.17
USP6NLQ92738 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC28.62■■■□□ 2.17
USP6NLQ92738 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
USP6NLQ92738 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC28.61■■■□□ 2.17
USP6NLQ92738 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC28.61■■■□□ 2.17
USP6NLQ92738 RAP2CP1-202ENST00000605179 643 ntBASIC28.61■■■□□ 2.17
USP6NLQ92738 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.61■■■□□ 2.17
USP6NLQ92738 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC28.6■■■□□ 2.17
USP6NLQ92738 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC28.6■■■□□ 2.17
USP6NLQ92738 ST7-205ENST00000393446 2114 ntTSL 5 BASIC28.59■■■□□ 2.17
USP6NLQ92738 RP9P-202ENST00000450133 1212 ntBASIC28.59■■■□□ 2.17
USP6NLQ92738 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC28.59■■■□□ 2.17
USP6NLQ92738 TXNRD2-205ENST00000400525 1874 ntTSL 5 BASIC28.59■■■□□ 2.17
USP6NLQ92738 ST7-AS1-201ENST00000456775 1889 ntBASIC28.59■■■□□ 2.17
USP6NLQ92738 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC28.59■■■□□ 2.17
USP6NLQ92738 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC28.58■■■□□ 2.17
USP6NLQ92738 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC28.58■■■□□ 2.17
USP6NLQ92738 SPCS2P3-201ENST00000500401 656 ntBASIC28.58■■■□□ 2.17
USP6NLQ92738 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC28.58■■■□□ 2.17
USP6NLQ92738 TRIR-205ENST00000592273 783 ntTSL 3 BASIC28.58■■■□□ 2.17
USP6NLQ92738 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC28.58■■■□□ 2.17
USP6NLQ92738 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC28.58■■■□□ 2.17
USP6NLQ92738 FKBP1A-205ENST00000439640 1583 ntTSL 3 BASIC28.58■■■□□ 2.17
USP6NLQ92738 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC28.58■■■□□ 2.17
USP6NLQ92738 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC28.57■■■□□ 2.16
USP6NLQ92738 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC28.57■■■□□ 2.16
USP6NLQ92738 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC28.57■■■□□ 2.16
USP6NLQ92738 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC28.56■■■□□ 2.16
USP6NLQ92738 PKIG-205ENST00000372891 1443 ntAPPRIS P1 TSL 2 BASIC28.56■■■□□ 2.16
USP6NLQ92738 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC28.56■■■□□ 2.16
USP6NLQ92738 AC093536.1-201ENST00000569153 554 ntBASIC28.56■■■□□ 2.16
USP6NLQ92738 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC28.55■■■□□ 2.16
USP6NLQ92738 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC28.55■■■□□ 2.16
USP6NLQ92738 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC28.55■■■□□ 2.16
USP6NLQ92738 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC28.54■■■□□ 2.16
USP6NLQ92738 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC28.54■■■□□ 2.16
USP6NLQ92738 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC28.53■■■□□ 2.16
USP6NLQ92738 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
USP6NLQ92738 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
USP6NLQ92738 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC28.53■■■□□ 2.16
USP6NLQ92738 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC28.53■■■□□ 2.16
USP6NLQ92738 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC28.53■■■□□ 2.16
USP6NLQ92738 TNK2-201ENST00000333602 5270 ntAPPRIS P1 TSL 1 (best) BASIC28.52■■■□□ 2.16
USP6NLQ92738 AC010980.1-201ENST00000587192 1142 ntBASIC28.52■■■□□ 2.16
USP6NLQ92738 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC28.52■■■□□ 2.16
USP6NLQ92738 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC28.52■■■□□ 2.16
USP6NLQ92738 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC28.52■■■□□ 2.16
USP6NLQ92738 ANGPTL6-203ENST00000589181 1579 ntTSL 5 BASIC28.51■■■□□ 2.15
USP6NLQ92738 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC28.51■■■□□ 2.15
USP6NLQ92738 AC074183.2-201ENST00000623112 922 ntBASIC28.51■■■□□ 2.15
USP6NLQ92738 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
USP6NLQ92738 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC28.51■■■□□ 2.15
USP6NLQ92738 CBX4-201ENST00000269397 2664 ntAPPRIS P2 TSL 1 (best) BASIC28.51■■■□□ 2.15
USP6NLQ92738 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.51■■■□□ 2.15
USP6NLQ92738 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC28.51■■■□□ 2.15
USP6NLQ92738 ST7-202ENST00000323984 2142 ntTSL 5 BASIC28.51■■■□□ 2.15
USP6NLQ92738 ST7-207ENST00000393449 2127 ntTSL 5 BASIC28.51■■■□□ 2.15
USP6NLQ92738 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
USP6NLQ92738 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC28.5■■■□□ 2.15
USP6NLQ92738 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC28.5■■■□□ 2.15
USP6NLQ92738 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC28.5■■■□□ 2.15
USP6NLQ92738 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC28.5■■■□□ 2.15
USP6NLQ92738 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
USP6NLQ92738 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
USP6NLQ92738 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC28.49■■■□□ 2.15
USP6NLQ92738 TSPY4-202ENST00000426950 1179 ntAPPRIS P5 TSL 5 BASIC28.48■■■□□ 2.15
USP6NLQ92738 PFN2-211ENST00000489155 636 ntTSL 4 BASIC28.48■■■□□ 2.15
USP6NLQ92738 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
USP6NLQ92738 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC28.47■■■□□ 2.15
USP6NLQ92738 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
USP6NLQ92738 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC28.47■■■□□ 2.15
USP6NLQ92738 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC28.47■■■□□ 2.15
USP6NLQ92738 TMEM120A-214ENST00000493111 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
USP6NLQ92738 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
USP6NLQ92738 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC28.46■■■□□ 2.15
USP6NLQ92738 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC28.46■■■□□ 2.15
USP6NLQ92738 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC28.46■■■□□ 2.15
USP6NLQ92738 AC103834.1-201ENST00000520383 144 ntBASIC28.46■■■□□ 2.15
USP6NLQ92738 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC28.46■■■□□ 2.15
USP6NLQ92738 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC28.45■■■□□ 2.14
USP6NLQ92738 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC28.45■■■□□ 2.14
USP6NLQ92738 BHLHE23-202ENST00000612929 1109 ntBASIC28.45■■■□□ 2.14
USP6NLQ92738 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC28.44■■■□□ 2.14
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms