Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 UPF3A-209ENST00000492270 494 ntTSL 2 BASIC32.79■■■□□ 2.84
RTF1Q92541 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC32.79■■■□□ 2.84
RTF1Q92541 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC32.79■■■□□ 2.84
RTF1Q92541 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC32.79■■■□□ 2.84
RTF1Q92541 AC018358.1-201ENST00000631079 1402 ntBASIC32.78■■■□□ 2.84
RTF1Q92541 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC32.78■■■□□ 2.84
RTF1Q92541 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC32.78■■■□□ 2.84
RTF1Q92541 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC32.77■■■□□ 2.84
RTF1Q92541 MOB2-207ENST00000614710 705 ntTSL 5 BASIC32.77■■■□□ 2.84
RTF1Q92541 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC32.77■■■□□ 2.84
RTF1Q92541 PROC-203ENST00000409048 1586 ntTSL 5 BASIC32.77■■■□□ 2.84
RTF1Q92541 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC32.77■■■□□ 2.84
RTF1Q92541 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC32.76■■■□□ 2.84
RTF1Q92541 AL157400.5-201ENST00000507624 621 ntBASIC32.76■■■□□ 2.83
RTF1Q92541 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RTF1Q92541 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC32.76■■■□□ 2.83
RTF1Q92541 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC32.76■■■□□ 2.83
RTF1Q92541 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC32.75■■■□□ 2.83
RTF1Q92541 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC32.75■■■□□ 2.83
RTF1Q92541 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC32.75■■■□□ 2.83
RTF1Q92541 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC32.75■■■□□ 2.83
RTF1Q92541 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTF1Q92541 SETBP1-202ENST00000426838 1785 ntAPPRIS ALT2 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTF1Q92541 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC32.74■■■□□ 2.83
RTF1Q92541 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTF1Q92541 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC32.74■■■□□ 2.83
RTF1Q92541 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RTF1Q92541 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC32.73■■■□□ 2.83
RTF1Q92541 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC32.73■■■□□ 2.83
RTF1Q92541 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC32.72■■■□□ 2.83
RTF1Q92541 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC32.71■■■□□ 2.83
RTF1Q92541 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC32.71■■■□□ 2.83
RTF1Q92541 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC32.7■■■□□ 2.83
RTF1Q92541 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC32.7■■■□□ 2.83
RTF1Q92541 LTC4S-205ENST00000486713 496 ntTSL 2 BASIC32.7■■■□□ 2.83
RTF1Q92541 NTF6A-201ENST00000591175 560 ntBASIC32.7■■■□□ 2.83
RTF1Q92541 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC32.7■■■□□ 2.83
RTF1Q92541 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC32.69■■■□□ 2.82
RTF1Q92541 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC32.69■■■□□ 2.82
RTF1Q92541 ENDOG-201ENST00000372642 1172 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
RTF1Q92541 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RTF1Q92541 HYI-213ENST00000583037 1322 ntTSL 5 BASIC32.68■■■□□ 2.82
RTF1Q92541 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC32.68■■■□□ 2.82
RTF1Q92541 DRD5P2-201ENST00000421395 2012 ntBASIC32.68■■■□□ 2.82
RTF1Q92541 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC32.67■■■□□ 2.82
RTF1Q92541 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC32.67■■■□□ 2.82
RTF1Q92541 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC32.67■■■□□ 2.82
RTF1Q92541 NELFB-202ENST00000634710 1887 ntAPPRIS P2 TSL 1 (best) BASIC32.66■■■□□ 2.82
RTF1Q92541 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC32.66■■■□□ 2.82
RTF1Q92541 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC32.66■■■□□ 2.82
RTF1Q92541 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC32.66■■■□□ 2.82
RTF1Q92541 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC32.66■■■□□ 2.82
RTF1Q92541 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC32.65■■■□□ 2.82
RTF1Q92541 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC32.64■■■□□ 2.82
RTF1Q92541 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC32.64■■■□□ 2.82
RTF1Q92541 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC32.64■■■□□ 2.82
RTF1Q92541 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC32.64■■■□□ 2.82
RTF1Q92541 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC32.62■■■□□ 2.81
RTF1Q92541 REST-210ENST00000638187 1334 ntTSL 5 BASIC32.62■■■□□ 2.81
RTF1Q92541 ARL6IP4-208ENST00000439686 796 ntAPPRIS ALT2 TSL 3 BASIC32.62■■■□□ 2.81
RTF1Q92541 U85056.1-201ENST00000616429 682 ntBASIC32.62■■■□□ 2.81
RTF1Q92541 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC32.62■■■□□ 2.81
RTF1Q92541 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC32.62■■■□□ 2.81
RTF1Q92541 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RTF1Q92541 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC32.61■■■□□ 2.81
RTF1Q92541 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC32.61■■■□□ 2.81
RTF1Q92541 SMPD5-203ENST00000639008 1464 ntBASIC32.6■■■□□ 2.81
RTF1Q92541 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC32.59■■■□□ 2.81
RTF1Q92541 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC32.59■■■□□ 2.81
RTF1Q92541 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC32.59■■■□□ 2.81
RTF1Q92541 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC32.58■■■□□ 2.81
RTF1Q92541 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.81
RTF1Q92541 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC32.57■■■□□ 2.8
RTF1Q92541 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC32.57■■■□□ 2.8
RTF1Q92541 C16orf52-207ENST00000569656 1257 ntTSL 5 BASIC32.57■■■□□ 2.8
RTF1Q92541 AC007029.1-201ENST00000604183 313 ntBASIC32.57■■■□□ 2.8
RTF1Q92541 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC32.56■■■□□ 2.8
RTF1Q92541 ZMYND19-201ENST00000298585 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.56■■■□□ 2.8
RTF1Q92541 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC32.56■■■□□ 2.8
RTF1Q92541 FKBP1A-204ENST00000400137 1622 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RTF1Q92541 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC32.55■■■□□ 2.8
RTF1Q92541 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC32.55■■■□□ 2.8
RTF1Q92541 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC32.55■■■□□ 2.8
RTF1Q92541 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC32.55■■■□□ 2.8
RTF1Q92541 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC32.55■■■□□ 2.8
RTF1Q92541 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC32.55■■■□□ 2.8
RTF1Q92541 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC32.54■■■□□ 2.8
RTF1Q92541 TIMM29-201ENST00000270502 1425 ntAPPRIS P1 TSL 1 (best) BASIC32.54■■■□□ 2.8
RTF1Q92541 FLVCR1-AS1-203ENST00000426161 892 ntTSL 1 (best) BASIC32.54■■■□□ 2.8
RTF1Q92541 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC32.53■■■□□ 2.8
RTF1Q92541 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC32.53■■■□□ 2.8
RTF1Q92541 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC32.53■■■□□ 2.8
RTF1Q92541 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC32.52■■■□□ 2.8
RTF1Q92541 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RTF1Q92541 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC32.52■■■□□ 2.8
RTF1Q92541 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC32.51■■■□□ 2.79
RTF1Q92541 AC025884.2-201ENST00000553429 711 ntBASIC32.51■■■□□ 2.79
RTF1Q92541 AC012354.3-201ENST00000623734 483 ntBASIC32.51■■■□□ 2.79
RTF1Q92541 WHAMMP3-201ENST00000611636 1609 ntBASIC32.51■■■□□ 2.79
RTF1Q92541 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms