Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.73■■□□□ 1.87
DDX1Q92499 ANKRD53-203ENST00000441349 1797 ntTSL 5 BASIC26.72■■□□□ 1.87
DDX1Q92499 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX1Q92499 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC26.71■■□□□ 1.87
DDX1Q92499 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC26.71■■□□□ 1.87
DDX1Q92499 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX1Q92499 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
DDX1Q92499 DUX4L11-201ENST00000611504 1267 ntBASIC26.71■■□□□ 1.87
DDX1Q92499 DUX4L12-201ENST00000614593 1267 ntBASIC26.71■■□□□ 1.87
DDX1Q92499 DUX4L14-201ENST00000621227 1267 ntBASIC26.71■■□□□ 1.87
DDX1Q92499 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
DDX1Q92499 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC26.71■■□□□ 1.87
DDX1Q92499 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.87
DDX1Q92499 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
DDX1Q92499 RPS2-210ENST00000530225 765 ntTSL 2 BASIC26.7■■□□□ 1.86
DDX1Q92499 EMID1-202ENST00000404755 2049 ntTSL 5 BASIC26.7■■□□□ 1.86
DDX1Q92499 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.7■■□□□ 1.86
DDX1Q92499 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX1Q92499 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX1Q92499 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
DDX1Q92499 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC26.69■■□□□ 1.86
DDX1Q92499 PRR5-ARHGAP8-202ENST00000361473 2013 ntTSL 5 BASIC26.68■■□□□ 1.86
DDX1Q92499 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
DDX1Q92499 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX1Q92499 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX1Q92499 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.67■■□□□ 1.86
DDX1Q92499 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
DDX1Q92499 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
DDX1Q92499 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC26.66■■□□□ 1.86
DDX1Q92499 MEN1-204ENST00000377313 1871 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
DDX1Q92499 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX1Q92499 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.66■■□□□ 1.86
DDX1Q92499 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
DDX1Q92499 CAPNS1-215ENST00000628018 1509 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
DDX1Q92499 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX1Q92499 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
DDX1Q92499 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
DDX1Q92499 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
DDX1Q92499 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
DDX1Q92499 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC26.64■■□□□ 1.86
DDX1Q92499 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
DDX1Q92499 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
DDX1Q92499 RFFL-206ENST00000447669 2030 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
DDX1Q92499 PKM-203ENST00000389093 2279 ntTSL 5 BASIC26.63■■□□□ 1.85
DDX1Q92499 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
DDX1Q92499 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC26.61■■□□□ 1.85
DDX1Q92499 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX1Q92499 CR559946.2-201ENST00000623684 991 ntBASIC26.61■■□□□ 1.85
DDX1Q92499 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC26.61■■□□□ 1.85
DDX1Q92499 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DDX1Q92499 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
DDX1Q92499 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
DDX1Q92499 NSMCE4A-201ENST00000369017 1224 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
DDX1Q92499 SPATA33-209ENST00000579310 1490 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
DDX1Q92499 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
DDX1Q92499 SAE1-209ENST00000598840 1831 ntTSL 5 BASIC26.58■■□□□ 1.85
DDX1Q92499 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
DDX1Q92499 NRARP-201ENST00000356628 1770 ntAPPRIS P1 BASIC26.58■■□□□ 1.85
DDX1Q92499 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC26.58■■□□□ 1.84
DDX1Q92499 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX1Q92499 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
DDX1Q92499 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.57■■□□□ 1.84
DDX1Q92499 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.57■■□□□ 1.84
DDX1Q92499 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC26.57■■□□□ 1.84
DDX1Q92499 AL449106.1-201ENST00000608517 1980 ntBASIC26.57■■□□□ 1.84
DDX1Q92499 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX1Q92499 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
DDX1Q92499 ANKRD9-205ENST00000560748 1413 ntAPPRIS P1 TSL 2 BASIC26.56■■□□□ 1.84
DDX1Q92499 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC26.55■■□□□ 1.84
DDX1Q92499 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.55■■□□□ 1.84
DDX1Q92499 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC26.54■■□□□ 1.84
DDX1Q92499 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC26.54■■□□□ 1.84
DDX1Q92499 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
DDX1Q92499 ARPC2-201ENST00000295685 1605 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX1Q92499 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
DDX1Q92499 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.52■■□□□ 1.84
DDX1Q92499 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.52■■□□□ 1.84
DDX1Q92499 IRAK1-205ENST00000429936 2127 ntTSL 5 BASIC26.51■■□□□ 1.84
DDX1Q92499 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.51■■□□□ 1.83
DDX1Q92499 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC26.51■■□□□ 1.83
DDX1Q92499 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
DDX1Q92499 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.5■■□□□ 1.83
DDX1Q92499 FLT1-202ENST00000539099 1911 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
DDX1Q92499 AC008813.1-201ENST00000536597 885 ntBASIC26.5■■□□□ 1.83
DDX1Q92499 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
DDX1Q92499 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
DDX1Q92499 SOWAHD-201ENST00000343905 1552 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
DDX1Q92499 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC26.48■■□□□ 1.83
DDX1Q92499 WHAMMP3-201ENST00000611636 1609 ntBASIC26.48■■□□□ 1.83
DDX1Q92499 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX1Q92499 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26.48■■□□□ 1.83
DDX1Q92499 TBX1-201ENST00000329705 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC26.48■■□□□ 1.83
DDX1Q92499 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
DDX1Q92499 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms