Protein–RNA interactions for Protein: Q91XZ8

Pcdhb22, Protocadherin beta 22, mousemouse

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb22Q91XZ8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb22Q91XZ8 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC26.73■■□□□ 1.87
Pcdhb22Q91XZ8 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC26.72■■□□□ 1.87
Pcdhb22Q91XZ8 Asf1a-201ENSMUST00000020004 2201 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 A830010M20Rik-207ENSMUST00000162298 1408 ntTSL 5 BASIC26.71■■□□□ 1.87
Pcdhb22Q91XZ8 Rbm45-201ENSMUST00000046389 1898 ntAPPRIS P1 TSL 1 (best) BASIC26.7■■□□□ 1.86
Pcdhb22Q91XZ8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Gm20208-202ENSMUST00000219905 1528 ntTSL 1 (best) BASIC26.69■■□□□ 1.86
Pcdhb22Q91XZ8 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 Terc-201ENSMUST00000082862 423 ntBASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
Pcdhb22Q91XZ8 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Pcdhb22Q91XZ8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Pcdhb22Q91XZ8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb22Q91XZ8 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Pcdhb22Q91XZ8 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb22Q91XZ8 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Pcdhb22Q91XZ8 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb22Q91XZ8 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Pcdhb22Q91XZ8 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Pcdhb22Q91XZ8 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Olfm2-203ENSMUST00000215999 1895 ntAPPRIS ALT2 TSL 3 BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Pcdhb22Q91XZ8 Gm42699-201ENSMUST00000198104 1657 ntBASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Kcnj6-201ENSMUST00000095873 1773 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Pcdhb22Q91XZ8 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb22Q91XZ8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
Pcdhb22Q91XZ8 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Gm9910-201ENSMUST00000195385 1550 ntBASIC26.58■■□□□ 1.85
Pcdhb22Q91XZ8 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Scarna2-201ENSMUST00000157560 414 ntBASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Hecw2-202ENSMUST00000097741 1132 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
Pcdhb22Q91XZ8 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Pcdhb22Q91XZ8 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC26.55■■□□□ 1.84
Pcdhb22Q91XZ8 Gm9806-201ENSMUST00000051080 552 ntBASIC26.55■■□□□ 1.84
Pcdhb22Q91XZ8 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
Pcdhb22Q91XZ8 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Gm21989-201ENSMUST00000174530 1609 ntTSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC26.53■■□□□ 1.84
Pcdhb22Q91XZ8 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
Pcdhb22Q91XZ8 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Hist2h3c1-201ENSMUST00000176059 1820 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Hist2h3c1-202ENSMUST00000177796 1825 ntBASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Oaz2-206ENSMUST00000153700 1843 ntAPPRIS P2 TSL 5 BASIC26.51■■□□□ 1.83
Pcdhb22Q91XZ8 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Gm16437-201ENSMUST00000025669 507 ntBASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC26.49■■□□□ 1.83
Pcdhb22Q91XZ8 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Gng3-201ENSMUST00000096259 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC26.48■■□□□ 1.83
Pcdhb22Q91XZ8 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Ube2j2-202ENSMUST00000103175 1309 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Gm11175-201ENSMUST00000116172 543 ntBASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Nckap5los-201ENSMUST00000159738 1712 ntTSL 2 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Prr5-202ENSMUST00000171460 1719 ntAPPRIS ALT2 TSL 1 (best) BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Tmem158-201ENSMUST00000068140 1712 ntAPPRIS P1 BASIC26.47■■□□□ 1.83
Pcdhb22Q91XZ8 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
Retrieved 100 of 76,532 protein–RNA pairs in 107.7 ms