Protein–RNA interactions for Protein: Q91VR5

Ddx1, ATP-dependent RNA helicase DDX1, mousemouse

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx1Q91VR5 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx1Q91VR5 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.6■■□□□ 1.37
Ddx1Q91VR5 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx1Q91VR5 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx1Q91VR5 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC23.59■■□□□ 1.37
Ddx1Q91VR5 Jmjd6-201ENSMUST00000047616 1668 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx1Q91VR5 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC23.58■■□□□ 1.37
Ddx1Q91VR5 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.58■■□□□ 1.37
Ddx1Q91VR5 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx1Q91VR5 Vmac-201ENSMUST00000067931 2174 ntAPPRIS P3 TSL 1 (best) BASIC23.57■■□□□ 1.36
Ddx1Q91VR5 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Uncx-201ENSMUST00000172997 2498 ntAPPRIS P1 TSL 1 (best) BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Acvr2b-201ENSMUST00000035093 1729 ntTSL 5 BASIC23.56■■□□□ 1.36
Ddx1Q91VR5 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC23.55■■□□□ 1.36
Ddx1Q91VR5 Npas1-201ENSMUST00000002053 2091 ntAPPRIS P1 TSL 5 BASIC23.54■■□□□ 1.36
Ddx1Q91VR5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ddx1Q91VR5 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC23.53■■□□□ 1.36
Ddx1Q91VR5 Nrsn1-201ENSMUST00000057866 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.53■■□□□ 1.36
Ddx1Q91VR5 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx1Q91VR5 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC23.52■■□□□ 1.36
Ddx1Q91VR5 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC23.52■■□□□ 1.36
Ddx1Q91VR5 Tmem70-203ENSMUST00000177501 1636 ntAPPRIS P3 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx1Q91VR5 Vps37b-201ENSMUST00000040967 2522 ntAPPRIS P1 TSL 1 (best) BASIC23.51■■□□□ 1.35
Ddx1Q91VR5 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC23.51■■□□□ 1.35
Ddx1Q91VR5 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC23.51■■□□□ 1.35
Ddx1Q91VR5 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC23.51■■□□□ 1.35
Ddx1Q91VR5 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Gm12366-201ENSMUST00000121722 873 ntBASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Gm5786-201ENSMUST00000085368 882 ntBASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC23.5■■□□□ 1.35
Ddx1Q91VR5 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC23.49■■□□□ 1.35
Ddx1Q91VR5 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx1Q91VR5 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx1Q91VR5 Gm11687-201ENSMUST00000118911 886 ntBASIC23.48■■□□□ 1.35
Ddx1Q91VR5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC23.48■■□□□ 1.35
Ddx1Q91VR5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.48■■□□□ 1.35
Ddx1Q91VR5 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx1Q91VR5 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC23.47■■□□□ 1.35
Ddx1Q91VR5 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC23.47■■□□□ 1.35
Ddx1Q91VR5 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC23.47■■□□□ 1.35
Ddx1Q91VR5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.46■■□□□ 1.35
Ddx1Q91VR5 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC23.46■■□□□ 1.35
Ddx1Q91VR5 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.35
Ddx1Q91VR5 Tmem9b-201ENSMUST00000033333 1703 ntAPPRIS P2 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx1Q91VR5 Gm42699-201ENSMUST00000198104 1657 ntBASIC23.45■■□□□ 1.34
Ddx1Q91VR5 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC23.45■■□□□ 1.34
Ddx1Q91VR5 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx1Q91VR5 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC23.44■■□□□ 1.34
Ddx1Q91VR5 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Kctd2-201ENSMUST00000103035 1764 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC23.43■■□□□ 1.34
Ddx1Q91VR5 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx1Q91VR5 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx1Q91VR5 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.42■■□□□ 1.34
Ddx1Q91VR5 Ybx3-202ENSMUST00000087865 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx1Q91VR5 Stambp-207ENSMUST00000206592 2152 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx1Q91VR5 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx1Q91VR5 Rnf39-201ENSMUST00000040498 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx1Q91VR5 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.41■■□□□ 1.34
Ddx1Q91VR5 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx1Q91VR5 Scarna2-201ENSMUST00000157560 414 ntBASIC23.4■■□□□ 1.34
Ddx1Q91VR5 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx1Q91VR5 Gm9806-201ENSMUST00000051080 552 ntBASIC23.4■■□□□ 1.34
Ddx1Q91VR5 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC23.4■■□□□ 1.34
Ddx1Q91VR5 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.34
Ddx1Q91VR5 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx1Q91VR5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.39■■□□□ 1.33
Ddx1Q91VR5 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx1Q91VR5 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx1Q91VR5 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC23.39■■□□□ 1.33
Ddx1Q91VR5 Ddrgk1-201ENSMUST00000089559 1238 ntAPPRIS P1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx1Q91VR5 Porcn-201ENSMUST00000077595 1872 ntAPPRIS P4 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx1Q91VR5 Porcn-204ENSMUST00000089403 1854 ntAPPRIS ALT1 TSL 1 (best) BASIC23.38■■□□□ 1.33
Ddx1Q91VR5 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.38■■□□□ 1.33
Ddx1Q91VR5 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
Ddx1Q91VR5 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx1Q91VR5 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC23.37■■□□□ 1.33
Ddx1Q91VR5 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
Ddx1Q91VR5 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
Ddx1Q91VR5 Il17rd-202ENSMUST00000223942 2186 ntBASIC23.35■■□□□ 1.33
Ddx1Q91VR5 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms