Protein–RNA interactions for Protein: Q91VN6

Ddx41, Probable ATP-dependent RNA helicase DDX41, mousemouse

Known RBP Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx41Q91VN6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
Ddx41Q91VN6 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC25.95■■□□□ 1.74
Ddx41Q91VN6 Gm9812-201ENSMUST00000061934 968 ntBASIC25.95■■□□□ 1.74
Ddx41Q91VN6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx41Q91VN6 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx41Q91VN6 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC25.94■■□□□ 1.74
Ddx41Q91VN6 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC25.93■■□□□ 1.74
Ddx41Q91VN6 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC25.93■■□□□ 1.74
Ddx41Q91VN6 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx41Q91VN6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC25.93■■□□□ 1.74
Ddx41Q91VN6 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.93■■□□□ 1.74
Ddx41Q91VN6 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
Ddx41Q91VN6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC25.91■■□□□ 1.74
Ddx41Q91VN6 Kcnip2-208ENSMUST00000161886 693 ntAPPRIS P3 TSL 1 (best) BASIC25.91■■□□□ 1.74
Ddx41Q91VN6 Gm37847-201ENSMUST00000192163 1497 ntBASIC25.91■■□□□ 1.74
Ddx41Q91VN6 Gm31748-201ENSMUST00000194938 1497 ntBASIC25.91■■□□□ 1.74
Ddx41Q91VN6 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.9■■□□□ 1.74
Ddx41Q91VN6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx41Q91VN6 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
Ddx41Q91VN6 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 AC122317.2-201ENSMUST00000218708 1248 ntBASIC25.88■■□□□ 1.73
Ddx41Q91VN6 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC25.88■■□□□ 1.73
Ddx41Q91VN6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx41Q91VN6 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx41Q91VN6 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx41Q91VN6 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC25.87■■□□□ 1.73
Ddx41Q91VN6 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
Ddx41Q91VN6 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx41Q91VN6 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx41Q91VN6 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC25.86■■□□□ 1.73
Ddx41Q91VN6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC25.85■■□□□ 1.73
Ddx41Q91VN6 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC25.85■■□□□ 1.73
Ddx41Q91VN6 Gm27502-201ENSMUST00000183495 199 ntBASIC25.84■■□□□ 1.73
Ddx41Q91VN6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
Ddx41Q91VN6 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
Ddx41Q91VN6 Gm9910-201ENSMUST00000195385 1550 ntBASIC25.83■■□□□ 1.73
Ddx41Q91VN6 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
Ddx41Q91VN6 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
Ddx41Q91VN6 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC25.82■■□□□ 1.72
Ddx41Q91VN6 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC25.82■■□□□ 1.72
Ddx41Q91VN6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx41Q91VN6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx41Q91VN6 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx41Q91VN6 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx41Q91VN6 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
Ddx41Q91VN6 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx41Q91VN6 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC25.8■■□□□ 1.72
Ddx41Q91VN6 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
Ddx41Q91VN6 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC25.79■■□□□ 1.72
Ddx41Q91VN6 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC25.79■■□□□ 1.72
Ddx41Q91VN6 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx41Q91VN6 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx41Q91VN6 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
Ddx41Q91VN6 Il17rd-202ENSMUST00000223942 2186 ntBASIC25.78■■□□□ 1.72
Ddx41Q91VN6 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
Ddx41Q91VN6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx41Q91VN6 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
Ddx41Q91VN6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
Ddx41Q91VN6 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC25.77■■□□□ 1.72
Ddx41Q91VN6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
Ddx41Q91VN6 Igfbp3-201ENSMUST00000020702 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC25.76■■□□□ 1.71
Ddx41Q91VN6 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC25.75■■□□□ 1.71
Ddx41Q91VN6 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC25.75■■□□□ 1.71
Ddx41Q91VN6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx41Q91VN6 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC25.75■■□□□ 1.71
Ddx41Q91VN6 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
Ddx41Q91VN6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx41Q91VN6 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx41Q91VN6 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC25.74■■□□□ 1.71
Ddx41Q91VN6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC25.74■■□□□ 1.71
Ddx41Q91VN6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx41Q91VN6 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC25.74■■□□□ 1.71
Ddx41Q91VN6 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms