Protein–RNA interactions for Protein: Q8VHY0

Cspg4, Chondroitin sulfate proteoglycan 4, mousemouse

Predictions only

Length 2,327 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cspg4Q8VHY0 Htatsf1-202ENSMUST00000114751 1128 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg4Q8VHY0 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
Cspg4Q8VHY0 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Cspg4Q8VHY0 Fads2-201ENSMUST00000025567 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg4Q8VHY0 Gm28040-202ENSMUST00000184603 890 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
Cspg4Q8VHY0 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Cspg4Q8VHY0 1700016K19Rik-201ENSMUST00000066408 921 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg4Q8VHY0 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Cspg4Q8VHY0 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
Cspg4Q8VHY0 Terc-201ENSMUST00000082862 423 ntBASIC20.02■□□□□ 0.79
Cspg4Q8VHY0 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg4Q8VHY0 Smco4-203ENSMUST00000215907 994 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg4Q8VHY0 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg4Q8VHY0 Tmem150b-201ENSMUST00000086363 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Cspg4Q8VHY0 Gm43566-201ENSMUST00000196851 808 ntBASIC20.01■□□□□ 0.79
Cspg4Q8VHY0 Gm45444-201ENSMUST00000211394 898 ntBASIC20■□□□□ 0.79
Cspg4Q8VHY0 Lsm4-201ENSMUST00000034311 925 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg4Q8VHY0 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20■□□□□ 0.79
Cspg4Q8VHY0 Slc16a6-203ENSMUST00000070872 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
Cspg4Q8VHY0 Ube2k-203ENSMUST00000201266 1449 ntTSL 5 BASIC19.99■□□□□ 0.79
Cspg4Q8VHY0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg4Q8VHY0 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg4Q8VHY0 Zc3h6-201ENSMUST00000110319 1484 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
Cspg4Q8VHY0 Ap1ar-210ENSMUST00000200409 2580 ntTSL 5 BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 Rpl34-201ENSMUST00000062601 624 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 B430218F22Rik-201ENSMUST00000181168 1495 ntAPPRIS P1 BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 Gm42501-201ENSMUST00000200220 1026 ntBASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC19.98■□□□□ 0.79
Cspg4Q8VHY0 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 Nudt3-203ENSMUST00000114886 996 ntTSL 2 BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 AC161180.1-201ENSMUST00000223439 933 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
Cspg4Q8VHY0 Nkain1-201ENSMUST00000105993 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Fam96b-203ENSMUST00000164884 918 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Tmem196-202ENSMUST00000183694 845 ntTSL 3 BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Mpp6-202ENSMUST00000036236 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Adgrb2-207ENSMUST00000120204 5170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Cadm1-206ENSMUST00000143026 1643 ntTSL 5 BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Pgp-201ENSMUST00000053024 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Rnf220-212ENSMUST00000221654 1949 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
Cspg4Q8VHY0 Bag1-203ENSMUST00000191273 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg4Q8VHY0 Ethe1-201ENSMUST00000077191 1484 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg4Q8VHY0 Slc35b2-207ENSMUST00000226086 850 ntBASIC19.95■□□□□ 0.78
Cspg4Q8VHY0 Prr7-201ENSMUST00000046533 1359 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
Cspg4Q8VHY0 Ltb-203ENSMUST00000173600 905 ntAPPRIS ALT2 TSL 5 BASIC19.94■□□□□ 0.78
Cspg4Q8VHY0 Pdf-201ENSMUST00000055316 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cspg4Q8VHY0 Tor2a-208ENSMUST00000177382 396 ntTSL 5 BASIC19.94■□□□□ 0.78
Cspg4Q8VHY0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
Cspg4Q8VHY0 Tmx4-202ENSMUST00000110119 596 ntTSL 2 BASIC19.93■□□□□ 0.78
Cspg4Q8VHY0 Dhrs11-201ENSMUST00000047560 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg4Q8VHY0 Eid1-201ENSMUST00000164756 1691 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
Cspg4Q8VHY0 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC19.93■□□□□ 0.78
Cspg4Q8VHY0 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.93■□□□□ 0.78
Cspg4Q8VHY0 Cyp2r1-202ENSMUST00000119712 917 ntTSL 5 BASIC19.92■□□□□ 0.78
Cspg4Q8VHY0 Foxe3-201ENSMUST00000050940 867 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
Cspg4Q8VHY0 Snx21-203ENSMUST00000152471 1243 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg4Q8VHY0 H2afj-202ENSMUST00000203982 577 ntAPPRIS ALT1 TSL 3 BASIC19.92■□□□□ 0.78
Cspg4Q8VHY0 Serp2-201ENSMUST00000064517 748 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Cspg4Q8VHY0 Hoxb3-201ENSMUST00000055334 1890 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg4Q8VHY0 Gng12-203ENSMUST00000114224 680 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Cspg4Q8VHY0 Gng12-206ENSMUST00000114227 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg4Q8VHY0 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Cspg4Q8VHY0 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cspg4Q8VHY0 Dazap1-203ENSMUST00000105362 2081 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cspg4Q8VHY0 Socs1-201ENSMUST00000038099 1220 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Cspg4Q8VHY0 Fam96b-201ENSMUST00000093234 639 ntTSL 5 BASIC19.9■□□□□ 0.78
Cspg4Q8VHY0 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Cspg4Q8VHY0 Ntn5-203ENSMUST00000183120 1491 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cspg4Q8VHY0 Hnrnpul1-202ENSMUST00000108401 1240 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Cspg4Q8VHY0 Gm44866-201ENSMUST00000208774 391 ntTSL 2 BASIC19.89■□□□□ 0.77
Cspg4Q8VHY0 Ak2-201ENSMUST00000030583 986 ntAPPRIS P4 TSL 1 (best) BASIC19.89■□□□□ 0.77
Cspg4Q8VHY0 Rps2-ps6-201ENSMUST00000095471 855 ntBASIC19.89■□□□□ 0.77
Cspg4Q8VHY0 Gm16286-202ENSMUST00000125127 1683 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cspg4Q8VHY0 Kctd6-201ENSMUST00000022272 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Cspg4Q8VHY0 4930527J03Rik-201ENSMUST00000094270 543 ntBASIC19.88■□□□□ 0.77
Cspg4Q8VHY0 Srcap-202ENSMUST00000098025 1257 ntTSL 5 BASIC19.88■□□□□ 0.77
Cspg4Q8VHY0 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Cspg4Q8VHY0 Dynll1-202ENSMUST00000112090 729 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Cspg4Q8VHY0 Eif5a-213ENSMUST00000164359 1281 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
Cspg4Q8VHY0 Cckbr-202ENSMUST00000181339 1326 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cspg4Q8VHY0 March5-202ENSMUST00000112391 1293 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Cspg4Q8VHY0 March2-203ENSMUST00000172767 1381 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Cspg4Q8VHY0 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC19.86■□□□□ 0.77
Cspg4Q8VHY0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cspg4Q8VHY0 Ankrd49-205ENSMUST00000216037 1037 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Cspg4Q8VHY0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.86■□□□□ 0.77
Cspg4Q8VHY0 Apcdd1-202ENSMUST00000163716 1888 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Cspg4Q8VHY0 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cspg4Q8VHY0 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cspg4Q8VHY0 4930597O21Rik-201ENSMUST00000065878 984 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Cspg4Q8VHY0 Tlx2-201ENSMUST00000089641 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Cspg4Q8VHY0 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Gm44428-201ENSMUST00000204474 874 ntBASIC19.84■□□□□ 0.77
Cspg4Q8VHY0 Lsm4-205ENSMUST00000210987 636 ntTSL 5 BASIC19.84■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 144.1 ms