Protein–RNA interactions for Protein: Q8VHR0

Pcdh18, Protocadherin 18, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh18Q8VHR0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
Pcdh18Q8VHR0 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh18Q8VHR0 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh18Q8VHR0 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
Pcdh18Q8VHR0 Dmtn-209ENSMUST00000228295 2572 ntBASIC21.77■■□□□ 1.08
Pcdh18Q8VHR0 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
Pcdh18Q8VHR0 Bckdhb-201ENSMUST00000034801 1472 ntAPPRIS P3 TSL 1 (best) BASIC21.77■■□□□ 1.07
Pcdh18Q8VHR0 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Pcdh18Q8VHR0 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC21.76■■□□□ 1.07
Pcdh18Q8VHR0 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh18Q8VHR0 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh18Q8VHR0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Pcdh18Q8VHR0 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Pcdh18Q8VHR0 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC21.74■■□□□ 1.07
Pcdh18Q8VHR0 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Pcdh18Q8VHR0 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh18Q8VHR0 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Pcdh18Q8VHR0 Bin1-201ENSMUST00000025239 2451 ntAPPRIS P3 TSL 2 BASIC21.73■■□□□ 1.07
Pcdh18Q8VHR0 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh18Q8VHR0 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh18Q8VHR0 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC21.73■■□□□ 1.07
Pcdh18Q8VHR0 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Pcdh18Q8VHR0 Cbln2-204ENSMUST00000169470 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Pcdh18Q8VHR0 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh18Q8VHR0 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.71■■□□□ 1.07
Pcdh18Q8VHR0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Pcdh18Q8VHR0 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
Pcdh18Q8VHR0 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh18Q8VHR0 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh18Q8VHR0 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh18Q8VHR0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Pcdh18Q8VHR0 Pan3-209ENSMUST00000176600 5541 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh18Q8VHR0 Gm30023-201ENSMUST00000197970 889 ntBASIC21.69■■□□□ 1.06
Pcdh18Q8VHR0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Pcdh18Q8VHR0 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh18Q8VHR0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Pcdh18Q8VHR0 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh18Q8VHR0 Arhgap23-201ENSMUST00000093940 2409 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh18Q8VHR0 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh18Q8VHR0 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
Pcdh18Q8VHR0 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
Pcdh18Q8VHR0 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh18Q8VHR0 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
Pcdh18Q8VHR0 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Pcdh18Q8VHR0 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Gas2l1-202ENSMUST00000056649 2847 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
Pcdh18Q8VHR0 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh18Q8VHR0 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC21.65■■□□□ 1.06
Pcdh18Q8VHR0 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh18Q8VHR0 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
Pcdh18Q8VHR0 Ipp-202ENSMUST00000106479 2118 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh18Q8VHR0 Ipp-201ENSMUST00000030461 2115 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.06
Pcdh18Q8VHR0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Pcdh18Q8VHR0 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh18Q8VHR0 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Pcdh18Q8VHR0 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.64■■□□□ 1.05
Pcdh18Q8VHR0 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh18Q8VHR0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh18Q8VHR0 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC21.63■■□□□ 1.05
Pcdh18Q8VHR0 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Pcdh18Q8VHR0 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh18Q8VHR0 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
Pcdh18Q8VHR0 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh18Q8VHR0 Rmnd5a-201ENSMUST00000002292 6165 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Pcdh18Q8VHR0 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
Pcdh18Q8VHR0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh18Q8VHR0 H3f3aos-201ENSMUST00000097448 2905 ntBASIC21.6■■□□□ 1.05
Pcdh18Q8VHR0 Barhl1-203ENSMUST00000113849 2102 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh18Q8VHR0 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Pcdh18Q8VHR0 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Pcdh18Q8VHR0 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Pcdh18Q8VHR0 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.58■■□□□ 1.05
Pcdh18Q8VHR0 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Pcdh18Q8VHR0 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC21.57■■□□□ 1.04
Pcdh18Q8VHR0 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 43.1 ms