Protein–RNA interactions for Protein: Q8R550

Sh3kbp1, SH3 domain-containing kinase-binding protein 1, mousemouse

Known RBP Predictions only

Length 709 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3kbp1Q8R550 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.33■■□□□ 1.33
Sh3kbp1Q8R550 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC23.33■■□□□ 1.33
Sh3kbp1Q8R550 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Gm12818-201ENSMUST00000117562 1349 ntBASIC23.33■■□□□ 1.32
Sh3kbp1Q8R550 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC23.32■■□□□ 1.32
Sh3kbp1Q8R550 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm27502-201ENSMUST00000183495 199 ntBASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
Sh3kbp1Q8R550 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
Sh3kbp1Q8R550 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3kbp1Q8R550 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
Sh3kbp1Q8R550 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.28■■□□□ 1.32
Sh3kbp1Q8R550 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
Sh3kbp1Q8R550 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
Sh3kbp1Q8R550 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
Sh3kbp1Q8R550 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.24■■□□□ 1.31
Sh3kbp1Q8R550 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
Sh3kbp1Q8R550 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
Sh3kbp1Q8R550 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Gdf7-202ENSMUST00000220073 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
Sh3kbp1Q8R550 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
Sh3kbp1Q8R550 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
Sh3kbp1Q8R550 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm9812-201ENSMUST00000061934 968 ntBASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm9910-201ENSMUST00000195385 1550 ntBASIC23.18■■□□□ 1.3
Sh3kbp1Q8R550 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Gm7332-201ENSMUST00000118351 454 ntBASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
Sh3kbp1Q8R550 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
Sh3kbp1Q8R550 4930426D05Rik-204ENSMUST00000144487 1393 ntTSL 5 BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 AC122317.2-201ENSMUST00000218708 1248 ntBASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Sh3kbp1Q8R550 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3kbp1Q8R550 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC23.14■■□□□ 1.3
Sh3kbp1Q8R550 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
Retrieved 100 of 76,532 protein–RNA pairs in 82.2 ms